Evidence map›Paper›PMID 19279087›Full record

ArticleJournal of virology2009

Regulation of episomal gene expression by KRAB/KAP1-mediated histone modifications.

Isabelle Barde, Elisa Laurenti, Sonia Verp, Anna Claire Groner, Christopher Towne, Viviane Padrun, Patrick Aebischer, Andreas Trumpp, Didier Trono

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Multifaceted role ofMedComm · 2024
    Review
  2. Article
  3. Article
  4. Multifaceted Roles of TRIM Proteins in Colorectal Carcinoma.International journal of molecular sciences · 2020
    Review
  5. Article
  6. Article
  7. The complexity of TRIM28 contribution to cancer.Journal of biomedical science · 2017
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Gypsy and the birth of the SCAN domain.Journal of virology · 2011
    Article
  18. KAP1 protein: an enigmatic master regulator of the genome.The Journal of biological chemistry · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Isabelle BardeSchool of Life Sciences, Frontiers in Genetics National Center for Competence in Research, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Elisa Laurenti
Sonia Verp
Anna Claire Groner
Christopher Towne
Viviane Padrun
Patrick Aebischer
Andreas Trumpp
Didier Trono
École Polytechnique Fédérale de Lausanne · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

KAP1 is an essential cofactor of KRAB zinc finger proteins, a family of vertebrate-specific epigenetic repressors of largely unknown functions encoded in the hundreds by the mouse and human genomes. So far, KRAB/KAP1-mediated gene regulation has been studied within the environment of chromosomal DNA. Here we demonstrate that KRAB/KAP1 regulation is fully functional within the context of episomal DNA, such as adeno-associated viral and nonintegrated lentiviral vectors, and is correlated with histone modifications typically associated with this epigenetic regulator.

Indexed as

AnimalsCell LineDNADNA-Binding ProteinsGene Expression RegulationGene SilencingHistonesHumansMiceMice, TransgenicPlasmidsPromoter Regions, GeneticProtein BindingRepressor ProteinsTripartite Motif-Containing Protein 28DNADNA-Binding ProteinsHistonesRepressor ProteinsTRIM28 protein, humanTripartite Motif-Containing Protein 28ZNF350 protein, human

Identifiers

PMID19279087
PMCPMC2681943
OpenAlexW2109099115

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.