Evidence map›Paper›PMID 19276285›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2009

Associations between single nucleotide polymorphisms in double-stranded DNA repair pathway genes and familial breast cancer.

Mary E Sehl, Lucy R Langer, Jeanette C Papp, Lorna Kwan, Joyce L Seldon, Geovanni Arellano, Jean Reiss, Elaine F Reed, Sugandha Dandekar, Yael Korin and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Evaluation ofCancer management and research · 2026
    Article
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  5. Cancers · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Mary E SehlDivisions of Hematology and Oncology and Geriatrics, Department of Medicine, David Geffen School of Medicine at University of California at Los Angeles, USA. msehl@mednet.ucla.edu
Lucy R Langer
Jeanette C Papp
Lorna Kwan
Joyce L Seldon
Geovanni Arellano
Jean Reiss
Elaine F Reed
Sugandha Dandekar
Yael Korin
Janet S Sinsheimer
Zuo-Feng Zhang
Patricia A Ganz
University of California, Los Angeles · US

Funding

Women's CancersP30CA016042 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Samuel Wheeler French · 1985 to 2026
$134.5M
STATISTICAL METHODS FOR GENE MAPPINGR01GM053275 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LANGE, KENNETH L · 1995 to 2019
$9.3M
UCLA Career Development Program in Cancer Prevention and Control ResearchR25CA087949 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BASTANI, ROSHAN · 2000 to 2014
$6.8M
NCI NIH HHS P30 CA016042NCI NIH HHS P30 CA 16042NCI NIH HHS R25 CA087949NCI NIH HHS R25T CA 87949NIGMS NIH HHS GM53275NIGMS NIH HHS R01 GM053275
6 · The paper itself

Abstract

purposeDNA damage recognition and repair play a major role in risk for breast cancer. We investigated 104 single nucleotide polymorphisms (SNP) in 17 genes whose protein products are involved in double-stranded break repair (DSBR). EXPERIMENTAL

designWe used a case-control design. Both the case individuals affected with breast cancer or with both breast and ovarian cancers and the controls had similar familial risk of breast cancer and were participants in a high-risk cancer registry.

resultsWe found that 12 of the polymorphisms are associated with breast or breast and ovarian cancers, most notably rs16888927, rs16888997, and rs16889040, found in introns of RAD21, suggesting that SNPs in other genes in the DSBR pathway in addition to BRCA1 and BRCA2 may affect breast cancer risk.

conclusionsSNPs within or near several DSBR DNA repair pathway genes are associated with breast cancer in individuals from a high-risk population. In addition, our study reemphasizes the unique perspective that recruitment of cases and controls from family cancer registries has for gene discovery studies.

Indexed as

DNA RepairGenetic Predisposition to DiseasePolymorphism, Single NucleotideAdultAgedAged, 80 and overBreast NeoplasmsCase-Control StudiesCell Cycle ProteinsDNA-Binding ProteinsFemaleGenes, BRCA1Genes, BRCA2HaplotypesHumansMiddle AgedCell Cycle ProteinsDNA-Binding ProteinsNuclear ProteinsPhosphoproteinsRAD21 protein, humanXRCC4 protein, human

Identifiers

PMID19276285
PMCPMC2778342
OpenAlexW2135689130

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.