Evidence map›Paper›PMID 19274734›Full record

ArticleProteins2009

Analysis of secondary structure and self-assembly of amelogenin by variable temperature circular dichroism and isothermal titration calorimetry.

Rajamani Lakshminarayanan, Il Yoon, Balachandra G Hegde, Daming Fan, Chang Du, Janet Moradian-Oldak

Abstract read
In one paragraph

Article in Proteins, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Amelogenin in Enamel Tissue Engineering.Advances in experimental medicine and biology · 2015
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Protein-mediated enamel mineralization.Frontiers in bioscience (Landmark edition) · 2012
    Review
  18. Article
  19. Article
  20. Probing the self-association, intermolecular contacts, and folding propensity of amelogenin.Protein science : a publication of the Protein Society · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rajamani LakshminarayananCenter for Craniofacial Molecular Biology, University of Southern California, Los Angeles, 90033, USA.
Il Yoon
Balachandra G Hegde
Daming Fan
Chang Du
Janet Moradian-Oldak
University of Southern California · USUniversity of California, Los Angeles · US

Funding

MATRIX-BASED MINERAL (MBM) ENAMEL BIOMIMETICSR01DE013414 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Janet Oldak · 2001 to 2026
$8.6M
INTRINSICALLY DISORDERED PROTEINS IN BIOMINERALIZATIONR01DE020099 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI OLDAK, JANET · 2009 to 2013
$2.0M
ACTION AND FUNCTION OF MMP-20 DURING ENAMEL FORMATIONR01DE015644 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI OLDAK, JANET · 2005 to 2008
$1.2M
MATRIX BASED MINERAL ENAMEL-BIOMIMETICSR56DE013414 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI OLDAK, JANET · 2018 to 2018
$387k
NIDCR NIH HHS DE-13414NIDCR NIH HHS DE-15644NIDCR NIH HHS R01 DE013414NIDCR NIH HHS R01 DE015644NIDCR NIH HHS R01 DE020099NIDCR NIH HHS R56 DE013414
6 · The paper itself

Abstract

Amelogenin is a proline-rich enamel matrix protein known to play an important role in the oriented growth of enamel crystals. Amelogenin self-assembles to form nanospheres and higher order structures mediated by hydrophobic interactions. This study aims to obtain a better insight into the relationship between primary-secondary structure and self-assembly of amelogenin by applying computational and biophysical methods. Variable temperature circular dichroism studies indicated that under physiological pH recombinant full-length porcine amelogenin contains unordered structures in equilibrium with polyproline type II (PPII) structure, the latter being more populated at lower temperatures. Increasing the concentration of rP172 resulted in the promotion of folding to an ordered beta-structured assembly. Isothermal titration calorimetry dilution studies revealed that at all temperatures, self-assembly is entropically driven due to the hydrophobic effect and the molar heat of assembly (DeltaH(A)) decreases with temperature. Using a computational approach, a profile of domains in the amino acid sequence that have a high propensity to assemble and to have PPII structures has been identified. We conclude that the assembly properties of amelogenin are due to complementarity between the hydrophobic and PPII helix prone regions.

Indexed as

TemperatureAmelogeninAnimalsCalorimetryCircular DichroismProtein Structure, SecondaryRecombinant ProteinsSwineAmelogeninRecombinant Proteins

Identifiers

PMID19274734
PMCPMC2748104
OpenAlexW2125591567

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.