Evidence map›Paper›PMID 19273590›Full record

ArticleMolecular and cellular biology2009

The hnRNA-binding proteins hnRNP L and PTB are required for efficient translation of the Cat-1 arginine/lysine transporter mRNA during amino acid starvation.

Mithu Majumder, Ibrahim Yaman, Francesca Gaccioli, Vladimir V Zeenko, Chuanping Wang, Mark G Caprara, Richard C Venema, Anton A Komar, Martin D Snider, Maria Hatzoglou

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Review
  3. hnRNPL expression dynamics in the embryo and placenta.Gene expression patterns : GEP · 2023
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. IRES Trans-Acting Factors, Key Actors of the Stress Response.International journal of molecular sciences · 2019
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Mithu MajumderDepartment of Nutrition, School of Medicine, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106-4954, USA.
Ibrahim Yaman
Francesca Gaccioli
Vladimir V Zeenko
Chuanping Wang
Mark G Caprara
Richard C Venema
Anton A Komar
Martin D Snider
Maria Hatzoglou
Case Western Reserve University · USAugusta University · USCleveland State University · USTÜBİTAK Marmara Research Center · TR

Funding

Regulation of Gene Expression During StressR01DK053307 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI HATZOGLOU, MARIA · 1998 to 2021
$9.6M
Translational Control by NutrientsR01DK060596 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI MARIA HATZOGLOU · 2002 to 2026
$6.3M
NIDDK NIH HHS R01 DK053307NIDDK NIH HHS R01DK053307NIDDK NIH HHS R01 DK060596NIDDK NIH HHS R01DK060596
6 · The paper itself

Abstract

The response to amino acid starvation involves the global decrease of protein synthesis and an increase in the translation of some mRNAs that contain an internal ribosome entry site (IRES). It was previously shown that translation of the mRNA for the arginine/lysine amino acid transporter Cat-1 increases during amino acid starvation via a mechanism that utilizes an IRES in the 5' untranslated region of the Cat-1 mRNA. It is shown here that polypyrimidine tract binding protein (PTB) and an hnRNA binding protein, heterogeneous nuclear ribonucleoprotein L (hnRNP L), promote the efficient translation of Cat-1 mRNA during amino acid starvation. Association of both proteins with Cat-1 mRNA increased during starvation with kinetics that paralleled that of IRES activation, although the levels and subcellular distribution of the proteins were unchanged. The sequence CUUUCU within the Cat-1 IRES was important for PTB binding and for the induction of translation during amino acid starvation. Binding of hnRNP L to the IRES or the Cat-1 mRNA in vivo was independent of PTB binding but was not sufficient to increase IRES activity or Cat-1 mRNA translation during amino acid starvation. In contrast, binding of PTB to the Cat-1 mRNA in vivo required hnRNP L. A wider role of hnRNP L in mRNA translation was suggested by the decrease of global protein synthesis in cells with reduced hnRNP L levels. It is proposed that PTB and hnRNP L are positive regulators of Cat-1 mRNA translation via the IRES under stress conditions that cause a global decrease of protein synthesis.

Indexed as

Protein Biosynthesis5' Untranslated RegionsAmino AcidsAnimalsCationic Amino Acid Transporter 1Cell LineGene Expression RegulationHeterogeneous-Nuclear Ribonucleoprotein LMiceNucleic Acid ConformationPolypyrimidine Tract-Binding ProteinRatsRecombinant Fusion ProteinsRibosomesRNA-Binding ProteinsRNA, Messenger5' Untranslated RegionsAmino AcidsCationic Amino Acid Transporter 1Heterogeneous-Nuclear Ribonucleoprotein LPolypyrimidine Tract-Binding ProteinRecombinant Fusion ProteinsRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID19273590
PMCPMC2682027
OpenAlexW2142721222

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.