Evidence map›Paper›PMID 19270184›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2009

The ortholog of human solute carrier family 35 member B1 (UDP-galactose transporter-related protein 1) is involved in maintenance of ER homeostasis and essential for larval development in Caenorhabditis elegans.

Katsufumi Dejima, Daisuke Murata, Souhei Mizuguchi, Kazuko H Nomura, Keiko Gengyo-Ando, Shohei Mitani, Shin Kamiyama, Shoko Nishihara, Kazuya Nomura

Open access · greenAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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  6. Xenobiotic metabolism and transport inJournal of toxicology and environmental health. Part B, Critical reviews · 2021
    Review
  7. Article
  8. Nucleotide Sugar Transporter SLC35 Family Structure and Function.Computational and structural biotechnology journal · 2019
    Review
  9. Article
  10. Article
  11. Galactose Supplementation in Patients With TMEM165-CDG Rescues the Glycosylation Defects.The Journal of clinical endocrinology and metabolism · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Katsufumi DejimaDepartment of Biology, Faculty of Sciences 33, Kyushu University, Fukuoka 812-8581, Japan.
Daisuke Murata
Souhei Mizuguchi
Kazuko H Nomura
Keiko Gengyo-Ando
Shohei Mitani
Shin Kamiyama
Shoko Nishihara
Kazuya Nomura
Japan Science and Technology Agency · JPKyushu University · JPSoka University of America · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the solute carrier 35B1 (SLC35B1) is evolutionarily conserved, its functions in metazoans remain unknown. To elucidate its function, we examined developmental roles of an SLC35B1 family gene (HUT-1: homolog of UDP-Gal transporter) in Caenorhabditis elegans. We isolated a deletion mutant of the gene and characterized phenotypes of the mutant and hut-1 RNAi-treated worms. GFP-HUT-1 reporter analysis was performed to examine gene expression patterns. We also tested whether several nucleotide sugar transporters can compensate for hut-1 deficiency. The hut-1 deletion mutant and RNAi worms showed larval growth defect and lethality with disrupted intestinal morphology. Inactivation of hut-1 induced chronic endoplasmic reticulum (ER) stress, and hut-1 showed genetic interactions with the atf-6, pek-1, and ire-1 genes involved in unfolded protein response signaling. ER ultrastructure and ER marker distribution in hut-1-deficient animals showed that HUT-1 is required for maintenance of ER structure. Reporter analysis revealed that HUT-1 is an ER protein ubiquitously expressed in tissues, including the intestine. Lethality and the ER stress phenotype of the mutant were rescued with the human hut-1 ortholog UGTrel1. These results indicate important roles for hut-1 in development and maintenance of ER homeostasis in C. elegans.

Indexed as

HomeostasisAnimalsCaenorhabditis elegansEndoplasmic ReticulumGene Expression RegulationGenes, ReporterLarvaMonosaccharide Transport ProteinsNucleotide Transport ProteinsPhenotypeRNA, Small InterferingSequence DeletionUDP-Galactose TranslocatorsMonosaccharide Transport ProteinsNucleotide Transport ProteinsRNA, Small InterferingUDP-Galactose Translocators

Identifiers

PMID19270184
PMCPMC2704591
OpenAlexW2045755893

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.