Evidence map›Paper›PMID 19269960›Full record

ArticleThe Journal of biological chemistry2009

Calpain expression and activity during lens fiber cell differentiation.

Alicia De Maria, Yanrong Shi, Nalin M Kumar, Steven Bassnett

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.3field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. [Calpain activation promotes dialysis-associated peritoneal fibrosis in rats].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2021
    Article
  6. Mutation of the TRPM3 cation channel underlies progressive cataract development and lens calcification associated with pro-fibrotic and immune cell responses.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Lens transcriptome profile during cataract development in Mip-null mice.Biochemical and biophysical research communications · 2016
    Article
  13. Article
  14. Activation of calpain by renin-angiotensin system in pleural mesothelial cells mediates tuberculous pleural fibrosis.American journal of physiology. Lung cellular and molecular physiology · 2016
    Article
  15. Birc7: A Late Fiber Gene of the Crystalline Lens.Investigative ophthalmology & visual science · 2015
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alicia De MariaDepartment of Ophthalmology and Visual Sciences, Washington University, St. Louis, Missouri 63110.
Yanrong ShiDepartment of Ophthalmology and Visual Sciences, Washington University, St. Louis, Missouri 63110.
Nalin M KumarDepartment of Ophthalmology and Visual Sciences, University of Illinois at Chicago, Chicago, Illinois 60612.
Steven BassnettDepartment of Ophthalmology and Visual Sciences, Washington University, St. Louis, Missouri 63110. Electronic address: bassnett@vision.wustl.edu.
University of Illinois Chicago · US

Funding

WASHINGTON UNIVERSITY CENTER VISION RESEARCHP30EY002687 · NEI · WASHINGTON UNIVERSITY · PI Philip Andrew Ruzycki · 1985 to 2026
$18.4M
Translational Core for Therapeutic and Diagnostic DevelopmentP30EY001792 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MCANANY, JAMES JASON · 1985 to 2025
$14.8M
Washington University Center for Translational NeuroscienceP30NS057105 · NINDS · WASHINGTON UNIVERSITY · PI HOLTZMAN, DAVID M. · 2006 to 2011
$8.7M
FIBER CELL FORMATION IN NORMAL AND CATARACTOUS LENSESR01EY009852 · NEI · WASHINGTON UNIVERSITY · PI BASSNETT, STEVEN · 1992 to 2021
$7.8M
NEI NIH HHS EY01792NEI NIH HHS EY02687NEI NIH HHS P30 EY002687NEI NIH HHS R01EY09852NINDS NIH HHS P30 NS057105
6 · The paper itself

Abstract

In animal models, the dysregulated activity of calcium-activated proteases, calpains, contributes directly to cataract formation. However, the physiological role of calpains in the healthy lens is not well defined. In this study, we examined the expression pattern of calpains in the mouse lens. Real time PCR and Western blotting data indicated that calpain 1, 2, 3, and 7 were expressed in lens fiber cells. Using controlled lysis, depth-dependent expression profiles for each calpain were obtained. These indicated that, unlike calpain 1, 2, and 7, which were most abundant in cells near the lens surface, calpain 3 expression was strongest in the deep cortical region of the lens. We detected calpain activities in vitro and showed that calpains were active in vivo by microinjecting fluorogenic calpain substrates into cortical fiber cells. To identify endogenous calpain substrates, membrane/cytoskeleton preparations were treated with recombinant calpain, and cleaved products were identified by two-dimensional difference electrophoresis/mass spectrometry. Among the calpain substrates identified by this approach was alphaII-spectrin. An antibody that specifically recognized calpain-cleaved spectrin was used to demonstrate that spectrin is cleaved in vivo, late in fiber cell differentiation, at or about the time that lens organelles are degraded. The generation of the calpain-specific spectrin cleavage product was not observed in lens tissue from calpain 3-null mice, indicating that calpain 3 is uniquely activated during lens fiber differentiation. Our data suggest a role for calpains in the remodeling of the membrane cytoskeleton that occurs with fiber cell maturation.

Indexed as

AnimalsCalpainCataractCell DifferentiationEnzyme ActivationEye ProteinsGene Expression Regulation, EnzymologicLens, CrystallineMiceMice, Mutant StrainsRecombinant ProteinsReverse Transcriptase Polymerase Chain ReactionSpectrinSubstrate SpecificityCalpainEye ProteinsRecombinant ProteinsSpectrinSPTBN2 protein, human

Identifiers

PMID19269960
PMCPMC2679455
OpenAlexW1984894634

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.