Evidence map›Paper›PMID 19267380›Full record

ArticleAngewandte Chemie (International ed. in English)2009

Probing the bioactive conformation of an archetypal natural product HDAC inhibitor with conformationally homogeneous triazole-modified cyclic tetrapeptides.

W Seth Horne, Christian A Olsen, John M Beierle, Ana Montero, M Reza Ghadiri

Open access · greenAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 151 citations in OpenAlex.

  1. Article
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  8. Article
  9. Approaches for peptide and protein cyclisation.Organic & biomolecular chemistry · 2021
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. 1,4-Disubstituted 1Frontiers in chemistry · 2019
    Article
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  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

W Seth HorneDepartment of Chemistry and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Christian A Olsen
John M Beierle
Ana Montero
M Reza Ghadiri
Scripps Research Institute · US

Funding

ORGANIC NANOTUBES DESIGN AND BIOLOGICAL APPLICATIONSR01GM052190 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI GHADIRI, M. REZA · 1995 to 2009
$3.7M
NIGMS NIH HHS GM52190NIGMS NIH HHS R01 GM052190
6 · The paper itself

Abstract

Fooling enzymes with mock amides: Analogues of apicidin, a cyclic-tetrapeptide inhibitor of histone deacetylase (HDAC), were designed with a 1,4- or 1,5-disubstituted 1,2,3-triazole in place of a backbone amide bond to fix the bond in question in either a trans-like or a cis-like configuration. Thus, the binding affinity of distinct peptide conformations (see picture) could be probed. One analogue proved in some cases to be superior to apicidin as an HDAC inhibitor.

Indexed as

Histone Deacetylase InhibitorsEnzyme InhibitorsHistone DeacetylasesPeptides, CyclicProtein ConformationStereoisomerismStructure-Activity RelationshipTriazolesapicidinEnzyme InhibitorsHistone Deacetylase InhibitorsHistone DeacetylasesPeptides, CyclicTriazoles

Identifiers

PMID19267380
PMCPMC3041267
OpenAlexW2122502745

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.