ArticleBMC plant biology2009
Genomic expression profiling of mature soybean (Glycine max) pollen.
Article in BMC plant biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
33 citing papers in PubMed, 73 citations in OpenAlex.
- Identifying long non-coding RNAs involved in heat stress response during wheat pollen development.Frontiers in plant science · 2024Article
- Genome-Wide Identification and Comparative Analysis ofInternational journal of molecular sciences · 2023Article
- Genome-Wide Identification and Analysis of Ariadne Gene Family Reveal Its Genetic Effects on Agronomic Traits ofInternational journal of molecular sciences · 2022Article
- How Do Pollen Allergens Sensitize?Frontiers in molecular biosciences · 2022Review
- Circular RNAs Repertoire and Expression Profile duringInternational journal of molecular sciences · 2021Article
- A Rapid Pipeline for Pollen- and Anther-Specific Gene Discovery Based on Transcriptome Profiling Analysis of Maize Tissues.International journal of molecular sciences · 2021Article
- Overlapping Patterns of Gene Expression Between Gametophyte and Sporophyte Phases in the FernFrontiers in plant science · 2018Article
- A novel role of the soybean clock gene LUX ARRHYTHMO in male reproductive development.Scientific reports · 2017Article
- Article
- Transcriptomes of Plant Gametophytes Have a Higher Proportion of Rapidly Evolving and Young Genes than Sporophytes.Molecular biology and evolution · 2016Article
- Bioinformatics resources for pollen.Plant reproduction · 2016Review
- Acclimation to high temperature during pollen development.Plant reproduction · 2016Review
- Digital Gene Expression Analysis of Populus simonii × P. nigra Pollen Germination and Tube Growth.Frontiers in plant science · 2016Article
- A decade of pollen transcriptomics.Plant reproduction · 2015Review
- De novo sequencing and analysis of the lily pollen transcriptome: an open access data source for an orphan plant species.Plant molecular biology · 2015Article
- The male germline of angiosperms: repertoire of an inconspicuous but important cell lineage.Frontiers in plant science · 2015Review
- Review
- A pollen-specific calmodulin-binding protein, NPG1, interacts with putative pectate lyases.Scientific reports · 2014Article
- The meiotic transcriptome architecture of plants.Frontiers in plant science · 2014Review
- Dynamic adaption of metabolic pathways during germination and growth of lily pollen tubes after inhibition of the electron transport chain.Plant physiology · 2013Article
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPollen, the male partner in the reproduction of flowering plants, comprises either two or three cells at maturity. The current knowledge of the pollen transcriptome is limited to the model plant systems Arabidopsis thaliana and Oryza sativa which have tri-cellular pollen grains at maturity. Comparative studies on pollen of other genera, particularly crop plants, are needed to understand the pollen gene networks that are subject to functional and evolutionary conservation. In this study, we used the Affymetrix Soybean GeneChip to perform transcriptional profiling on mature bi-cellular soybean pollen.
resultsCompared to the sporophyte transcriptome, the soybean pollen transcriptome revealed a restricted and unique repertoire of genes, with a significantly greater proportion of specifically expressed genes than is found in the sporophyte tissue. Comparative analysis shows that, among the 37,500 soybean transcripts addressed in this study, 10,299 transcripts (27.46%) are expressed in pollen. Of the pollen-expressed sequences, about 9,489 (92.13%) are also expressed in sporophytic tissues, and 810 (7.87%) are selectively expressed in pollen. Overall, the soybean pollen transcriptome shows an enrichment of transcription factors (mostly zinc finger family proteins), signal recognition receptors, transporters, heat shock-related proteins and members of the ubiquitin proteasome proteolytic pathway.
conclusionThis is the first report of a soybean pollen transcriptional profile. These data extend our current knowledge regarding regulatory pathways that govern the gene regulation and development of pollen. A comparison between transcription factors up-regulated in soybean and those in Arabidopsis revealed some divergence in the numbers and kinds of regulatory proteins expressed in both species.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.