Evidence map›Paper›PMID 19264785›Full record

ArticleJournal of virology2009

A yeast glycoprotein shows high-affinity binding to the broadly neutralizing human immunodeficiency virus antibody 2G12 and inhibits gp120 interactions with 2G12 and DC-SIGN.

Robert J Luallen, Hu Fu, Caroline Agrawal-Gamse, Innocent Mboudjeka, Wei Huang, Fang-Hua Lee, Lai-Xi Wang, Robert W Doms, Yu Geng

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Envelope glycans of immunodeficiency virions are almost entirely oligomannose antigens.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Robert J LuallenProSci Inc., 12170 Flint Place, Poway, CA 92064, USA.
Hu Fu
Caroline Agrawal-Gamse
Innocent Mboudjeka
Wei Huang
Fang-Hua Lee
Lai-Xi Wang
Robert W Doms
Yu Geng
ProSci Incorporated (United States) · USUniversity of Pennsylvania · USUniversity of Maryland, Baltimore · US

Funding

TRAINING IN HIV PATHOGENESIST32AI007632 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI Frederic D Bushman, James L. Riley · 2000 to 2026
$10.6M
HIV-1 Glycopeptides as ImmunogensR01AI067111 · NIAID · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI WANG, LAI-XI · 2006 to 2009
$1.4M
Developing Broadly Neutralizing MAbs for an HIV VaccineR43AI058724 · NIAID · PROSCI, INC. · PI GENG, YU · 2006 to 2007
$700k
NIAID NIH HHS AI058724NIAID NIH HHS AI067111NIAID NIH HHS R01 AI067111NIAID NIH HHS R43 AI058724NIAID NIH HHS T32 AI007632
6 · The paper itself

Abstract

The human immunodeficiency virus type 1 (HIV-1) envelope (Env) protein contains numerous N-linked carbohydrates that shield conserved peptide epitopes and promote trans infection by dendritic cells via binding to cell surface lectins. The potent and broadly neutralizing monoclonal antibody 2G12 binds a cluster of high-mannose-type oligosaccharides on the gp120 subunit of Env, revealing a conserved and highly exposed epitope on the glycan shield. To find an effective antigen for eliciting 2G12-like antibodies, we searched for endogenous yeast proteins that could bind to 2G12 in a panel of Saccharomyces cerevisiae glycosylation knockouts and discovered one protein that bound weakly in a Delta pmr1 strain deficient in hyperglycosylation. 2G12 binding to this protein, identified as Pst1, was enhanced by adding the Delta mnn1 deletion to the Delta pmr1 background, ensuring the exposure of terminal alpha1,2-linked mannose residues on the D1 and D3 arms of high-mannose glycans. However, optimum 2G12 antigenicity was found when Pst1, a heavily N-glycosylated protein, was expressed with homogenous Man(8)GlcNAc(2) structures in Delta och1 Delta mnn1 Delta mnn4 yeast. Surface plasmon resonance analysis of this form of Pst1 showed high affinity for 2G12, which translated into Pst1 efficiently inhibiting gp120 interactions with 2G12 and DC-SIGN and blocking 2G12-mediated neutralization of HIV-1 pseudoviruses. The high affinity of the yeast glycoprotein Pst1 for 2G12 highlights its potential as a novel antigen to induce 2G12-like antibodies.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalAntigen PresentationBroadly Neutralizing AntibodiesCell Adhesion MoleculesCross ReactionsDC-Specific ICAM-3 Grabbing NonintegrinEnzyme-Linked Immunosorbent AssayGlycoproteinsHIV-1HIV AntibodiesHIV Envelope Protein gp120HumansLectins, C-TypeMolecular Sequence DataPolysaccharides2G12 monoclonal antibodyAntibodies, MonoclonalBroadly Neutralizing AntibodiesCell Adhesion MoleculesDC-Specific ICAM-3 Grabbing NonintegrinGlycoproteinsHIV AntibodiesHIV Envelope Protein gp120Lectins, C-TypePolysaccharidesPST1 protein, S cerevisiaeReceptors, Cell SurfaceSaccharomyces cerevisiae Proteins

Identifiers

PMID19264785
PMCPMC2682088
OpenAlexW2070746076

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.