Evidence map›Paper›PMID 19251986›Full record

ArticleJournal of experimental botany2009

Different ways to die: cell death modes of the unicellular chlorophyte Dunaliella viridis exposed to various environmental stresses are mediated by the caspase-like activity DEVDase.

Carlos Jiménez, Juan M Capasso, Charles L Edelstein, Christopher J Rivard, Scott Lucia, Sophia Breusegem, Tomás Berl, María Segovia

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Responses ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  5. A Novel Algicidal Bacterium,Microbiology spectrum · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Cell Death in Evolutionary Transitions in Individuality.The Yale journal of biology and medicine · 2019
    Review
  10. Dronc-independent basal executioner caspase activity sustainsProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Article
  12. Article
  13. Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society · 2018
    Article
  14. Article
  15. Article
  16. Toxic Effects of Prodigiosin Secreted byFrontiers in microbiology · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Carlos JiménezDepartment of Ecology, Faculty of Sciences, University of Málaga, Bvd. Louis Pasteur s/n, E-29071 Málaga, Spain.
Juan M Capasso
Charles L Edelstein
Christopher J Rivard
Scott Lucia
Sophia Breusegem
Tomás Berl
María Segovia
University of Colorado Health · USUniversidad de Málaga · ES

Funding

ROLE OF CASPASES IN ISCHEMIC ACUTE RENAL FAILURER01DK056851 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI EDELSTEIN, CHARLES LOUIS · 2001 to 2010
$2.5M
NIDDK NIH HHS DK-56851NIDDK NIH HHS R01 DK056851
6 · The paper itself

Abstract

Programmed cell death is necessary for homeostasis in multicellular organisms and it is also widely recognized to occur in unicellular organisms. However, the mechanisms through which it occurs in unicells, and the enzymes involved within the final response is still the subject of heated debate. It is shown here that exposure of the unicellular microalga Dunaliella viridis to several environmental stresses, induced different cell death morphotypes, depending on the stimulus received. Senescent cells demonstrated classical and unambiguous apoptotic-like characteristics such as chromatin condensation, DNA fragmentation, intact organelles, and blebbing of the cell membrane. Acute heat shock caused general swelling and altered plasma membrane, but the presence of chromatin clusters and DNA strand breaks suggested a necrotic-like event. UV irradiated cells presented changes typical for necrosis, together with apoptotic characteristics resembling an intermediate cell-death phenotype termed aponecrosis-like. Cells subjected to hyperosmotic shock revealed chromatin spotting without DNA fragmentation, and extensive cytoplasmic swelling and vacuolization, comparable to a paraptotic-like cell death phenotype. Nitrogen-starved cells showed pyknosis, blebbing, and cytoplasmic consumption, indicating a similarity to autophagic/vacuolar-like cell death. The caspase-like activity DEVDase was measured by using the fluorescent substrate Ac-DEVD-AMC and antibodies against the human caspase-3 active enzyme cross-reacted with bands, the intensity of which paralleled the activity. All the environmental stresses tested produced a substantial increase in both DEVDase activity and protein levels. The irreversible caspase-3 inhibitor Z-DEVD-FMK completely inhibited the enzymatic activity whereas serine and aspartyl proteases inhibitors did not. These results show that cell death in D. viridis does not conform to a single pattern and that environmental stimuli may produce different types of cell death depending on the type and intensity of the stimulus, all of which help to understand the cell death-dependent and cell death-independent functions of caspase-like proteins. Hence, these data support the theory that alternative, non-apoptotic programmed cell death (PCDs), exist either in parallel or in an independent manner with apoptosis and were already present in single-celled organisms that evolved some 1.2-1.6 billion years ago.

Indexed as

EnvironmentStress, PhysiologicalCaspasesCell DeathCell ShapeChlorophytaDNA BreaksDNA FragmentationDNA, PlantImmunoblottingPeptide HydrolasesPlant ProteinsCaspasesDEVDaseDNA, PlantPeptide HydrolasesPlant Proteins

Identifiers

PMID19251986
PMCPMC2652065
OpenAlexW2119103836

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.