Evidence map›Paper›PMID 19251842›Full record

ArticleJournal of bacteriology2009

The putative coupling protein TcpA interacts with other pCW3-encoded proteins to form an essential part of the conjugation complex.

Jennifer A Steen, Trudi L Bannam, Wee Lin Teng, Rodney J Devenish, Julian I Rood

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Clostridium perfringens type A-E toxin plasmids.Research in microbiology · 2015
    Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Toxin plasmids of Clostridium perfringens.Microbiology and molecular biology reviews : MMBR · 2013
    Review
  15. Evolution of conjugation and type IV secretion systems.Molecular biology and evolution · 2013
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jennifer A SteenDepartment of Microbiology, Monash University, Clayton, Victoria 3800, Australia.
Trudi L Bannam
Wee Lin Teng
Rodney J Devenish
Julian I Rood
Australian Research Council · AUMonash University · AU

Funding

Clostridium perfringens Type B-D Virulence PlasmidsR01AI056177 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MC CLANE, BRUCE A, ROOD, JULIAN · 2003 to 2013
$3.8M
NIAID NIH HHS AI056177-03NIAID NIH HHS R01 AI056177
6 · The paper itself

Abstract

Conjugative plasmids encode antibiotic resistance determinants or toxin genes in the anaerobic pathogen Clostridium perfringens. The paradigm conjugative plasmid in this bacterium is pCW3, a 47-kb tetracycline resistance plasmid that encodes the unique tcp transfer locus. The tcp locus consists of 11 genes, intP and tcpA-tcpJ, at least three of which, tcpA, tcpF, and tcpH, are essential for the conjugative transfer of pCW3. In this study we examined protein-protein interactions involving TcpA, the putative coupling protein. Use of a bacterial two-hybrid system identified interactions between TcpA and TcpC, TcpG, and TcpH. This analysis also demonstrated TcpA, TcpC, and TcpG self-interactions, which were confirmed by chemical cross-linking studies. Examination of a series of deletion and site-directed derivatives of TcpA identified the domains and motifs required for these interactions. Based on these results, we have constructed a model for this unique conjugative transfer apparatus.

Indexed as

Conjugation, GeneticProtein Interaction MappingR FactorsBacterial ProteinsClostridium perfringensMultigene FamilyMutagenesis, Site-DirectedMutation, MissenseProtein BindingSequence DeletionTwo-Hybrid System TechniquesBacterial Proteins

Identifiers

PMID19251842
PMCPMC2681803
OpenAlexW1974931204

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.