Evidence map›Paper›PMID 19248199›Full record

ArticleWorld journal of gastroenterology2009

Genetic diagnosis strategy of hereditary non-polyposis colorectal cancer.

Jian-Qiu Sheng, Hong Zhang, Min Ji, Lei Fu, Hong Mu, Ming-Zhi Zhang, Ji-Sheng Huang, Min Han, Ai-Qin Li, Zhi Wei and 4 more

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Prevalence and spectrum ofHereditary cancer in clinical practice · 2019
    Article
  3. Advances in the study of Lynch syndrome in China.World journal of gastroenterology · 2015
    Review
  4. Correlation ofOncology letters · 2013
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Jian-Qiu ShengDepartment of Gastroenterology, General Hospital of Beijing Military Command, Dongcheng District, Beijing, China. jianqiu@263.net
Hong Zhang
Min Ji
Lei Fu
Hong Mu
Ming-Zhi Zhang
Ji-Sheng Huang
Min Han
Ai-Qin Li
Zhi Wei
Zi-Qin Sun
Zi-Tao Wu
Chang-Hong Xia
Shi-Rong Li
The Military General Hospital of Beijing PLA · CNGeneral Hospital of Jinan Military Command · CNHiroshima University · JPFirst Affiliated Hospital of Zhengzhou University · CNNational Natural Science Foundation of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo study the characteristics of mismatch repair gene mutation of Chinese hereditary non-polyposis colorectal cancer (HNPCC) and hMLH1 gene promoter methylation, and to improve the screening strategy and explore the pertinent test methods.

methodsA systematic analysis of 30 probands from HNPCC families in the north of China was performed by immunohistochemistry, microsatellite instability (MSI), gene mutation and methylation detection.

resultsHigh frequency microsatellite instability occurred in 25 probands (83.3%) of HNPCC family. Loss of hMLH1 and hMSH2 protein expression accounted for 88% of all microsatellite instability. Pathogenic mutation occurred in 14 samples and 3 novel mutational sites were discovered. Deletion of exons 1-6, 1-7 and 8 of hMSH2 was detected in 3 samples and no large fragment deletion was found in hMLH1. Of the 30 probands, hMLH1 gene promoter methylation occurred in 3 probands. The rate of gene micromutation detection combined with large fragment deletion detection was 46.7%-56.7%. The rate of the two methods in combination with methylation detection was 63.3%.

conclusionScientific and rational detection strategy can improve the detection rate of HNPCC. Based on traditional molecular genetics and combined with epigenetics, multiple detection methods can accurately diagnose HNPCC.

Indexed as

Adaptor Proteins, Signal TransducingColorectal Neoplasms, Hereditary NonpolyposisDNADNA Mismatch RepairDNA, NeoplasmExonsGerm-Line MutationHumansMicrosatellite InstabilityMutationMutL Protein Homolog 1MutS Homolog 2 ProteinNuclear ProteinsPolymerase Chain ReactionPromoter Regions, GeneticSequence DeletionAdaptor Proteins, Signal TransducingDNADNA, NeoplasmMLH1 protein, humanMSH2 protein, humanMutL Protein Homolog 1MutS Homolog 2 ProteinNuclear Proteins

Identifiers

PMID19248199
PMCPMC2653409
OpenAlexW2169171389

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.