Evidence map›Paper›PMID 19245254›Full record

ArticleBioconjugate chemistry2009

Bioconjugation and detection of lactosamine moiety using alpha1,3-galactosyltransferase mutants that transfer C2-modified galactose with a chemical handle.

Marta Pasek, Boopathy Ramakrishnan, Elizabeth Boeggeman, Maria Manzoni, Timothy J Waybright, Pradman K Qasba

Abstract read
In one paragraph

Article in Bioconjugate chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. C2-ketonylation of carbohydratesChemical science · 2022
    Article
  3. Chemical Glycoproteomics.Chemical reviews · 2016
    Review
  4. Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Marta PasekStructural Glycobiology Section, Nanobiology Program, NCI-Frederick, Frederick, MD 21702, USA.
Boopathy Ramakrishnan
Elizabeth Boeggeman
Maria Manzoni
Timothy J Waybright
Pradman K Qasba
Center for Cancer Research · USScience Applications International Corporation (United States) · US

Funding

Structure-Function Studies and Design of Novel GlycosyltransferasesZIABC009304 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI QASBA, PRADMAN K · 2009 to 2013
$1.2M
Utilizing Glycosyltransferases for BioconjugationZIABC010742 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI QASBA, PRADMAN K · 2009 to 2013
$1.1M
Using Glycosyltransferases for Conjugation of Single-Chain Antibodies and LipidsZIABC010805 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI QASBA, PRADMAN K · 2009 to 2010
$509k
Intramural NIH HHS ZIA BC010742NCI NIH HHS N01 CO012400NCI NIH HHS N01-CO-12400
6 · The paper itself

Abstract

Studies on wild-type and mutant glycosyltransferases have shown that they can transfer modified sugars with a versatile chemical handle, such as keto or azido group, that can be used for conjugation chemistry and detection of glycan residues on glycoconjugates. To detect the most prevalent glycan epitope, N-acetyllactosamine (LacNAc (Galbeta1-4GalNAcbeta)), we have mutated a bovine alpha1,3-galactosyltransferse (alpha3Gal-T)() enzyme which normally transfers Gal from UDP-Gal to the LacNAc acceptor, to transfer GalNAc or C2-modified galactose from their UDP derivatives. The alpha3Gal-T enzyme belongs to the alpha3Gal/GalNAc-T family that includes human blood group A and B glycosyltransferases, which transfer GalNAc and Gal, respectively, to the Gal moiety of the trisaccharide Fucalpha1-2Galbeta1-4GlcNAc. On the basis of the sequence and structure comparison of these enzymes, we have carried out rational mutation studies on the sugar donor-binding residues in bovine alpha3Gal-T at positions 280 to 282. A mutation of His280 to Leu/Thr/Ser/Ala or Gly and Ala281 and Ala282 to Gly resulted in the GalNAc transferase activity by the mutant alpha3Gal-T enzymes to 5-19% of their original Gal-T activity. We show that the mutants (280)SGG(282) and (280)AGG(282) with the highest GalNAc-T activity can also transfer modified sugars such as 2-keto-galactose or GalNAz from their respective UDP-sugar derivatives to LacNAc moiety present at the nonreducing end of glycans of asialofetuin, thus enabling the detection of LacNAc moiety of glycoproteins and glycolipids by a chemiluminescence method.

Indexed as

MutationAmino Acid SequenceAmino SugarsAnimalsBase SequenceCattleGalactoseGalactosyltransferasesHumansKineticsModels, MolecularMolecular Sequence DataSequence AlignmentAmino SugarsGalactoseGalactosyltransferasesN-acetyllactosamine

Identifiers

PMID19245254
PMCPMC3464485
OpenAlexW1991750906

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.