Evidence map›Paper›PMID 19244316›Full record

ArticleJournal of virology2009

Hepatitis B virus replication and release are independent of core lysine ubiquitination.

Mayra L Garcia, Rushelle Byfield, Michael D Robek

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Assembly and Release of Hepatitis B Virus.Cold Spring Harbor perspectives in medicine · 2015
    Review
  12. Article
  13. Article
  14. Review
  15. Viral takeover of the host ubiquitin system.Frontiers in microbiology · 2011
    Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mayra L GarciaDepartment of Pathology, Yale University School of Medicine, New Haven, CT 06520-8023, USA.
Rushelle Byfield
Michael D Robek
Yale University · US

Funding

Modulation of HBV Replication by the ImmunoproteasomeK22AI064757 · NIAID · YALE UNIVERSITY · PI ROBEK, MICHAEL D · 2005 to 2006
$268k
NIAID NIH HHS K22 AI064757NIAID NIH HHS K22 AI64757
6 · The paper itself

Abstract

Ubiquitin conjugation to lysine residues regulates a variety of protein functions, including endosomal trafficking and degradation. While ubiquitin plays an important role in the release of many viruses, the requirement for direct ubiquitin conjugation to viral structural proteins is less well understood. Some viral structural proteins require ubiquitin ligase activity, but not ubiquitin conjugation, for efficient release. Recent evidence has shown that, like other viruses, hepatitis B virus (HBV) requires a ubiquitin ligase for release from the infected cell. The HBV core protein contains two lysine residues (K7 and K96), and K96 has been suggested to function as a potential ubiquitin acceptor site based on the fact that previous studies have shown that mutation of this amino acid to alanine blocks HBV release. We therefore reexamined the potential connection between core lysine ubiquitination and HBV replication, protein trafficking, and virion release. In contrast to alanine substitution, we found that mutation of K96 to arginine, which compared to alanine is more conserved but also cannot mediate ubiquitin conjugation, does not affect either virus replication or virion release. We also found that the core lysine mutants display wild-type sensitivity to the antiviral activity of interferon, which demonstrates that ubiquitination of core lysines does not mediate the interferon-induced disruption of HBV capsids. However, mutation of K96 to arginine alters the nuclear-cytoplasmic distribution of core, leading to an accumulation in the nucleolus. In summary, these studies demonstrate that although ubiquitin may regulate the HBV replication cycle, these mechanisms function independently of direct lysine ubiquitination of core protein.

Indexed as

UbiquitinationVirus ReplicationAcetylcysteineAnimalsCell Line, TumorCell NucleolusDNA, ViralGene Expression Regulation, ViralHepatitis B virusHumansInterferon-alphaLysineMiceMutagenesis, Site-DirectedMutationProteasome Endopeptidase ComplexAcetylcysteineDNA, ViralInterferon-alphalactacystinLysineProteasome Endopeptidase ComplexUbiquitinViral Core Proteins

Identifiers

PMID19244316
PMCPMC2682080
OpenAlexW2110278782

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.