Evidence map›Paper›PMID 19240022›Full record

ArticleThe Journal of biological chemistry2009

Role of {alpha}-subunit VISIT-DG sequence residues Ser-347 and Gly-351 in the catalytic sites of Escherichia coli ATP synthase.

Wenzong Li, Laura E Brudecki, Alan E Senior, Zulfiqar Ahmad

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Energy metabolism controls phenotypes by protein efficiency and allocation.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Rate of hydrolysis in ATP synthase is fine-tuned by α-subunit motif controlling active site conformation.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  9. Article
  10. Review
  11. Two ATPases.The Journal of biological chemistry · 2012
    Review
  12. Article
  13. Article
  14. Double-lock ratchet mechanism revealing the role of alphaSER-344 in FoF1 ATP synthase.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  15. Article
  16. Dietary bioflavonoids inhibit Escherichia coli ATP synthase in a differential manner.International journal of biological macromolecules · 2010
    Article
  17. Inhibition of Escherichia coli ATP synthase by amphibian antimicrobial peptides.International journal of biological macromolecules · 2010
    Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Wenzong LiDepartment of Biological Sciences, East Tennessee State University, Johnson City, Tennessee 37614, USA.
Laura E Brudecki
Alan E Senior
Zulfiqar Ahmad

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This paper describes the role of alpha-subunit VISIT-DG sequence residues alphaSer-347 and alphaGly-351 in catalytic sites of Escherichia coli F(1)F(o) ATP synthase. X-ray structures show the very highly conserved alpha-subunit VISIT-DG sequence in close proximity to the conserved phosphate-binding residues alphaArg-376, betaArg-182, betaLys-155, and betaArg-246 in the phosphate-binding subdomain. Mutations alphaS347Q and alphaG351Q caused loss of oxidative phosphorylation and reduced ATPase activity of F(1)F(o) in membranes by 100- and 150-fold, respectively, whereas alphaS347A mutation showed only a 13-fold loss of activity and also retained some oxidative phosphorylation activity. The ATPase of alphaS347Q mutant was not inhibited, and the alphaS347A mutant was slightly inhibited by MgADP-azide, MgADP-fluoroaluminate, or MgADP-fluoroscandium, in contrast to wild type and alphaG351Q mutant. Whereas 7-chloro-4-nitrobenzo-2-oxa-1, 3-diazole (NBD-Cl) inhibited wild type and alphaG351Q mutant ATPase essentially completely, ATPase in alphaS347A or alphaS347Q mutant was inhibited maximally by approximately 80-90%, although reaction still occurred at residue betaTyr-297, proximal to the alpha-subunit VISIT-DG sequence, near the phosphate-binding pocket. Inhibition characteristics supported the conclusion that NBD-Cl reacts inbetaE (empty) catalytic sites, as shown previously by x-ray structure analysis. Phosphate protected against NBD-Cl inhibition in wild type and alphaG351Q mutant but not in alphaS347Q or alphaS347A mutant. The results demonstrate that alphaSer-347 is an additional residue involved in phosphate-binding and transition state stabilization in ATP synthase catalytic sites. In contrast, alphaGly-351, although strongly conserved and clearly important for function, appears not to play a direct role.

Indexed as

4-Chloro-7-nitrobenzofurazanAmino Acid SequenceAnimalsATP Synthetase ComplexesBase SequenceCatalytic DomainDicyclohexylcarbodiimideDithiothreitolEnzyme InhibitorsEscherichia coliEscherichia coli ProteinsGlycineHumansMolecular ConformationMolecular Sequence DataMutation4-Chloro-7-nitrobenzofurazanATP Synthetase ComplexesDicyclohexylcarbodiimideDithiothreitolEnzyme InhibitorsEscherichia coli ProteinsGlycineProtein SubunitsSerine

Identifiers

PMID19240022
PMCPMC2667762

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.