Evidence map›Paper›PMID 19239339›Full record

ArticleThe Journal of infectious diseases2009

Associations between CYP2B6 polymorphisms and pharmacokinetics after a single dose of nevirapine or efavirenz in African americans.

David W Haas, Tebeb Gebretsadik, Gail Mayo, Usha N Menon, Edward P Acosta, Ayumi Shintani, Michael Floyd, C Michael Stein, Grant R Wilkinson

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 104 citations in OpenAlex.

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  15. Efavirenz Metabolism: Influence of Polymorphic CYP2B6 Variants and Stereochemistry.Drug metabolism and disposition: the biological fate of chemicals · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

David W HaasUSA. david.w.haas@vanderbilt.edu
Tebeb Gebretsadik
Gail Mayo
Usha N Menon
Edward P Acosta
Ayumi Shintani
Michael Floyd
C Michael Stein
Grant R Wilkinson
Vanderbilt University · USCancer Research And Biostatistics · USMeharry Medical College · USUniversity of Alabama at Birmingham · US

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
VIROLOGY COREP30AI054999 · NIAID · VANDERBILT UNIVERSITY · PI D'AQUILA, RICHARD · 2003 to 2011
$10.3M
YOHIMBINE THERAPY IN AUTONOMIC FAILUREP01GM031304 · NIGMS · VANDERBILT UNIVERSITY · PI STEIN, CHARLES M. · 1985 to 2006
$8.1M
The Vanderbilt Institute for Clinical and Translational Research (VICTR) KL2KL2RR024977 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$3.0M
CNS Viral Dynamics and Cellular Immunity During AIDSR01MH071205 · NIMH · VANDERBILT UNIVERSITY · PI HAAS, DAVID W · 2005 to 2009
$1.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR) TL1TL1RR024978 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$1.3M
PHARMACOKINETICS &ANTIRETROVIRUS RESISTANCE TESTINGR01AI058696 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ACOSTA, EDWARD P · 2004 to 2006
$951k
NCRR NIH HHS KL2 RR024977NCRR NIH HHS RR024975NCRR NIH HHS TL1 RR024978NCRR NIH HHS UL1 RR024975NIAID NIH HHS AI058696NIAID NIH HHS AI071205NIAID NIH HHS AI54999NIAID NIH HHS P30 AI054999NIAID NIH HHS R01 AI058696NIGMS NIH HHS GM31304NIGMS NIH HHS P01 GM031304NIMH NIH HHS MH071205NIMH NIH HHS R01 MH071205
6 · The paper itself

Abstract

backgroundPolymorphisms in CYP2B6 affect the steady-state plasma concentrations of nevirapine and efavirenz. In many resource-limited countries, a single dose of nevirapine has been widely prescribed to pregnant women at delivery, to reduce mother-to-child transmission of human immunodeficiency virus type 1 (HIV-1). We characterized associations between genetic polymorphisms and the pharmacokinetics of single doses of nevirapine and efavirenz.

methodsPlasma drug concentrations were determined over the 13-day period after administration of a 200-mg oral dose of nevirapine to nonpregnant, HIV-negative African Americans. A 600-mg oral dose of efavirenz was subsequently administered, and pharmacokinetic sampling was repeated. Pharmacokinetic parameters were estimated using a noncompartmental approach. Primary analyses involved 2 CYP2B6 polymorphisms (516G --> T and 983T --> C) known to predict increased steady-state plasma nevirapine and efavirenz exposure. Exploratory analyses involved another 51 polymorphisms in CYP2B6, ABCB1, CYP3A4, and CYP3A5.

resultsOn the basis of the composite CYP2B6 516/983 genotype, the 34 participants comprised 10 extensive, 17 intermediate, and 7 slow metabolizer genotypes. The composite CYP2B6 516/983 genotype was significantly associated with plasma drug exposure and clearance for efavirenz but not nevirapine. Exploratory analyses suggested possible associations between additional CYP2B6 polymorphisms and the pharmacokinetics of nevirapine and efavirenz.

conclusionsSelective pressure for drug-resistant HIV-1 after administration of single-dose nevirapine may not differ substantially according to CYP2B6 516/983 genotype. Additional polymorphisms, genes, and populations warrant further study.

Indexed as

Polymorphism, GeneticAlkynesAnti-HIV AgentsArea Under CurveAryl Hydrocarbon HydroxylasesBenzoxazinesBlack or African AmericanBlack PeopleCyclopropanesCytochrome P-450 CYP2B6GenotypeHIV SeronegativityHumansLinkage DisequilibriumMetabolic Clearance RateNevirapineAlkynesAnti-HIV AgentsAryl Hydrocarbon HydroxylasesBenzoxazinesCyclopropanesCYP2B6 protein, humanCytochrome P-450 CYP2B6efavirenzNevirapineOxidoreductases, N-Demethylating

Identifiers

PMID19239339
PMCPMC2784690
OpenAlexW2097781012

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.