Evidence map›Paper›PMID 19238140›Full record

ArticleObesity (Silver Spring, Md.)2009

Susceptibility loci for adiposity phenotypes on 8p, 9p, and 16q in American Samoa and Samoa.

Karolina Aberg, Feng Dai, Guangyun Sun, Ember D Keighley, Subba R Indugula, Sarah T Roberts, Qi Zhang, Diane Smelser, Satupaitea Viali, John Tuitele and 4 more

Abstract read
In one paragraph

Article in Obesity (Silver Spring, Md.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. A stop-gain variant inHGG advances · 2023
    Pooled it
  2. Review
  3. Review
  4. Article
  5. Genomics of body fat distribution.Journal of genetics · 2021
    Review
  6. A missense variant in CREBRF is associated with taller stature in Samoans.American journal of human biology : the official journal of the Human Biology Council · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. INSIG2 variants, dietary patterns and metabolic risk in Samoa.European journal of clinical nutrition · 2013
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Behavioral and perceived stressor effects on urinary catecholamine excretion in adult Samoans.American journal of human biology : the official journal of the Human Biology Council
    Article
  20. Modernization and cardiometabolic risk in Samoan adolescents.American journal of human biology : the official journal of the Human Biology Council
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Karolina AbergDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Feng Dai
Guangyun Sun
Ember D Keighley
Subba R Indugula
Sarah T Roberts
Qi Zhang
Diane Smelser
Satupaitea Viali
John Tuitele
Li Jin
Ranjan Deka
Daniel E Weeks
Stephen T McGarvey

Funding

GENOME SCAN FOR OBESITY SUSCEPTIBILITY LOCI IN SAMOANSR01DK059642 · NIDDK · BROWN UNIVERSITY · PI MCGARVEY, STEPHEN T. · 2000 to 2004
$2.6M
NIDDK NIH HHS R01 DK059642NIDDK NIH HHS R01-DK59642
6 · The paper itself

Abstract

Obesity is a complex phenotype affected by genetic and environmental influences such as sociocultural factors and individual behaviors. Previously, we performed two separate genome-wide investigations for adiposity-related traits (BMI, percentage body fat (%BF), abdominal circumference (ABDCIR), and serum leptin and serum adiponectin levels) in families from American Samoa and in families from Samoa. The two polities have a common evolutionary history but have lately been influenced by variations in economic development, leading to differences in income and wealth and in dietary and physical activity patterns. We now present a genome-wide linkage scan of the combined samples from the two polities. We adjust for environmental covariates, including polity of residence, education, cigarette smoking, and farm work, and use variance component methods to calculate univariate and bivariate multipoint lod scores. We identified a region on 9p22 with genome-wide significant linkage for the bivariate phenotypes ABDCIR-%BF (1-d.f. lod 3.30) and BMI-%BF (1-d.f. lod 3.31) and two regions with genome-wide suggestive linkage on 8p12 and 16q23 for adiponectin (lod 2.74) and the bivariate phenotype leptin-ABDCIR (1-d.f. lod 3.17), respectively. These three regions have previously been reported to be linked to adiposity-related phenotypes in independent studies. However, the differences in results between this study and our previous polity-specific studies suggest that environmental effects are of different importance in the samples. These results strongly encourage further genetic studies of adiposity-related phenotypes where extended sets of carefully measured environmental factors are taken into account.

Indexed as

PhenotypeAdiponectinAdiposityAdultAgedAged, 80 and overAmerican SamoaChromosomes, Human, Pair 16Chromosomes, Human, Pair 8Chromosomes, Human, Pair 9FemaleGenetic Predisposition to DiseaseHumansLeptinMaleMiddle AgedAdiponectinLeptin

Identifiers

PMID19238140
PMCPMC2879592

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.