Evidence map›Paper›PMID 19237199›Full record

ArticleMolecular immunology2009

Novel nonclassical MHC class Ib genes associated with CD8 T cell development and thymic tumors.

Ana Goyos, Yuko Ohta, Sergey Guselnikov, Jacques Robert

Open access · greenAbstract read
In one paragraph

Article in Molecular immunology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
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  5. A Glimpse of the Peptide Profile Presentation byJournal of immunology (Baltimore, Md. : 1950) · 2020
    Article
  6. Distinct MHC class I-like interacting invariant T cell lineage at the forefront of mycobacterial immunity uncovered inProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. Review
  8. Evolution of nonclassical MHC-dependent invariant T cells.Cellular and molecular life sciences : CMLS · 2014
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Comparative and developmental study of the immune system in Xenopus.Developmental dynamics : an official publication of the American Association of Anatomists · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Ana GoyosDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA. Ana_Goyos@urmc.rochester.edu
Yuko Ohta
Sergey Guselnikov
Jacques Robert
University of Rochester Medical Center · USInstitute of Cytology and Genetics · RUUniversity of Maryland, Baltimore · US

Funding

A Xenopus Laevis Research Resource for ImmunologyR24AI059830 · NIAID · UNIVERSITY OF ROCHESTER · PI JACQUES Robert · 2004 to 2026
$7.7M
ONTOGENY AND PHYLOGENY OF THE MHCR01AI027877 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI FLAJNIK, MARTIN F · 1995 to 2009
$3.2M
ROLE OF NON-CLASSICAL MHC CLASS I AND HSPs IN IMMUNITYR01CA108982 · NCI · UNIVERSITY OF ROCHESTER · PI ROBERT, JACQUES · 2005 to 2009
$918k
Nonclassical MHC and Early Thymocyte DevelopmentF31AI068610 · NIAID · UNIVERSITY OF ROCHESTER · PI GOYOS, ANA S · 2006 to 2009
$156k
ONTOGENY AND PHYLOGENY OF THE MHCR29AI027877 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI FLAJNIK, MARTIN F. · 1989 to 1993
–
NCI NIH HHS R01 CA108982NCI NIH HHS R01-CA-108982-02NIAID NIH HHS AI27877NIAID NIH HHS F31 AI068610NIAID NIH HHS F31-AI068610NIAID NIH HHS R01 AI027877NIAID NIH HHS R24 AI059830NIAID NIH HHS R24-AI-059830
6 · The paper itself

Abstract

In jawed vertebrates, the heterogeneous nonclassical MHC class Ib (class Ib) gene family encodes molecules structurally similar to classical MHC class Ia (class Ia) but with more limited tissue distribution and lower polymorphism. In mammals, class Ib gene products are involved in stress responses, malignancy and differentiation of intrathymic CD8 T cells. The frog Xenopus laevis possesses at least 20 class Ib genes (XNCs), and 9 subfamilies have been defined so far. We have characterized two novel subfamilies, XNC10 and XNC11. XNC10 is phylogenetically and structurally distinct from both class Ia and other XNC genes. Besides thymic lymphoid tumors, XNC10 is preferentially expressed by circulating T cells and thymocytes of the CD8 lineage both in adult and in larvae from the onset of thymus organogenesis. XNC11 is expressed only by thymocytes and upregulated by several thymic lymphoid tumors. These data provide the first evidence of the expression of any class Ib genes in Xenopus larvae, and suggests evolutionary relationships between certain class Ib genes, malignancy and CD8 T cell ontogeny.

Indexed as

Amino Acid SequenceAnimalsCD8-Positive T-LymphocytesCell DifferentiationCell Line, TumorGene Expression ProfilingGenetic Predisposition to DiseaseHistocompatibility Antigens Class ILarvaMolecular Sequence DataMultigene FamilyPhylogenySequence Homology, Amino AcidThymus NeoplasmsXenopus laevisHistocompatibility Antigens Class IMICB antigen

Identifiers

PMID19237199
PMCPMC2743076
OpenAlexW2061165205

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.