Evidence map›Paper›PMID 19236911›Full record

ArticleGene2009

Structure and promoter characterization of aldo-keto reductase family 1 B10 gene.

Ziwen Liu, Linlin Zhong, Paulette A Krishack, Sarah Robbins, Julia X Cao, Yupei Zhao, Stephen Chung, Deliang Cao

Abstract read
In one paragraph

Article in Gene, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
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  11. Up-regulated aldo-keto reductase family 1 member B10 in chronic hepatitis C: association with serum alpha-fetoprotein and hepatocellular carcinoma.Liver international : official journal of the International Association for the Study of the Liver · 2012
    Article
  12. Overexpression and oncogenic function of aldo-keto reductase family 1B10 (AKR1B10) in pancreatic carcinoma.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Ziwen LiuDepartment of Medical Microbiology, Immunology, and Cell Biology, SimmonsCooper Cancer Institute, Southern Illinois University School of Medicine, 913 N. Rutledge Street, Springfield, IL 62702, USA.
Linlin Zhong
Paulette A Krishack
Sarah Robbins
Julia X Cao
Yupei Zhao
Stephen Chung
Deliang Cao
Southern Illinois University School of Medicine · USPeking Union Medical College Hospital · CNUniversity of Hong Kong · HK

Funding

Role of Aldose Reductase-Like-1 in Colon TumorigenesisR21CA122622 · NCI · SOUTHERN ILLINOIS UNIVERSITY SCH OF MED · PI CAO, DELIANG · 2008 to 2009
$360k
Aldose Reductase-Like-1, a Novel Hepatocellular Carcinoma Drug Resistant ProteinR21CA122327 · NCI · SOUTHERN ILLINOIS UNIVERSITY SCH OF MED · PI CAO, DELIANG · 2007 to 2008
$318k
NCI NIH HHS CA122327NCI NIH HHS CA122622NCI NIH HHS R21 CA122327NCI NIH HHS R21 CA122622
6 · The paper itself

Abstract

Aldo-keto reductase family 1 member B10 (AKR1B10) is overexpressed in human hepatocellular carcinoma, lung squamous carcinoma, and lung adenocarcinoma in smokers. Our recent studies have showed that AKR1B10 plays a critical role in the growth and proliferation of cancer cells by detoxifying reactive carbonyls and regulating fatty acid biosynthesis. However, little is known about the regulatory mechanisms of AKR1B10 expression. In this study, we determined the structure of AKR1B10 gene and characterized its promoter. The results demonstrated that AKR1B10 consists of 10 exons and 9 introns, stretching approximately 13.8 kb. A 5'-RACE study determined the transcriptional start site of AKR1B10 at 320 bp upstream of the ATG translational start codon. A TATA-like (TAATAA) and a CAAT box are present from -145 to -140 bp and -193 to -190 bp upstream of the transcriptional start site, respectively. Motif analysis recognized multiple putative oncogenic and tumor suppressor protein binding sites in the AKR1B10 promoter, including c-Ets-1, C/EBP, AP-1, and p53, but osmolytic response elements were not found. A -4091 bp of the 5'-flanking fragment of the AKR1B10 gene was capable of driving GFP and luciferase reporter gene expression in HepG2 cells derived from human hepatocellular carcinoma; progressive 5'-deletions revealed that a -255 bp fragment possesses full promoter activity.

Indexed as

Promoter Regions, GeneticAldehyde ReductaseAldo-Keto ReductasesBase SequenceGene DeletionGene Expression Regulation, NeoplasticHumansMolecular Sequence DataNeoplasmsAKR1B10 protein, humanAldehyde ReductaseAldo-Keto Reductases

Identifiers

PMID19236911
PMCPMC2668737
OpenAlexW1969820419

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.