Evidence map›Paper›PMID 19236904›Full record

ReviewBiochimica et biophysica acta2009

Role of chromatin states in transcriptional memory.

Sharmistha Kundu, Craig L Peterson

Abstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. SPR-5 and MET-2 function cooperatively to reestablish an epigenetic ground state during passage through the germ line.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  12. Article
  13. Article
  14. Article
  15. Epigenetic memories: structural marks or active circuits?Cellular and molecular life sciences : CMLS · 2012
    Review
  16. Chromatin accessibility at the HIV LTR promoter sets a threshold for NF-κB mediated viral gene expression.Integrative biology : quantitative biosciences from nano to macro · 2012
    Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sharmistha KunduInterdisciplinary Graduate Program and Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Craig L Peterson

Funding

Analysis of the yeast SWI1, SWI2, and SWI3 proteinsR37GM049650 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PETERSON, CRAIG L · 2006 to 2015
$4.9M
YEAST SWI1, SWI2, AND SWI3 PROTEINSR01GM049650 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PETERSON, CRAIG L · 1993 to 2016
$2.6M
NIGMS NIH HHS R01 GM049650NIGMS NIH HHS R37 GM049650
6 · The paper itself

Abstract

Establishment of cellular memory and its faithful propagation is critical for successful development of multicellular organisms. As pluripotent cells differentiate, choices in cell fate are inherited and maintained by their progeny throughout the lifetime of the organism. A major factor in this process is the epigenetic inheritance of specific transcriptional states or transcriptional memory. In this review, we discuss chromatin transitions and mechanisms by which they are inherited by subsequent generations. We also discuss illuminating cases of cellular memory in budding yeast and evaluate whether transcriptional memory in yeast is nuclear or cytoplasmically inherited.

Indexed as

ChromatinEpigenesis, GeneticTranscription, GeneticCell DivisionChromosomal Proteins, Non-HistoneDNA MethylationGene Expression Regulation, FungalGene SilencingHistonesSaccharomycetalesTranscription FactorsChromatinChromosomal Proteins, Non-HistoneHistonesSWI-SNF-B chromatin-remodeling complexTranscription Factors

Identifiers

PMID19236904
PMCPMC2692360

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.