Evidence map›Paper›PMID 19235721›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2009

Regulation of the Caenorhabditis elegans posterior Hox gene egl-5 by microRNA and the polycomb-like gene sop-2.

Hongjie Zhang, Scott W Emmons

Open access · greenAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. The multifaceted roles of microRNAs in differentiation.Current opinion in cell biology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Hongjie ZhangDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Scott W Emmons
Albert Einstein College of Medicine · US

Funding

GENETIC ANALYSIS OF MORPHOGENESIS IN A NEMATODER01GM039353 · NIGMS · YESHIVA UNIVERSITY · PI EMMONS, SCOTT W · 1988 to 2005
$1.9M
NIGMS NIH HHS R01 GM039353NIGMS NIH HHS R01 GM39353
6 · The paper itself

Abstract

In Caenorhabditis elegans, the domains of Hox gene expression are controlled by the novel global regulatory gene sop-2. We identified a region located 3' of the Hox gene egl-5 that promotes ectopic expression of an egl-5 reporter gene in a sop-2 mutant. SOP-2 could directly block positive regulatory factors acting in this region, or it could block their expression. We identified three possible miRNA binding sites within the egl-5 3' untranslated region (UTR). Cognate microRNAs are expressed in relevant tissues and can block egl-5 expression when expressed from a transgene. Mutation of the putative binding sites in the egl-5 3'UTR resulted in a modest degree of misexpression of a minimal egl-5 reporter gene, suggesting that microRNAs may contribute to the tight restriction of egl-5 expression to particular cell lineages.

Indexed as

3' Untranslated RegionsAnimalsBase SequenceBinding SitesCaenorhabditis elegansCaenorhabditis elegans ProteinsConserved SequenceDNAGene Expression Regulation, DevelopmentalGenes, ReporterHomeodomain ProteinsLarvaMicroRNAsMolecular Sequence DataMutationRepressor Proteins3' Untranslated RegionsCaenorhabditis elegans ProteinsDNAEgl-5 protein, C elegansHomeodomain ProteinsMicroRNAsRepressor ProteinsSop-2 protein, C elegansTranscription Factors

Identifiers

PMID19235721
PMCPMC3093708
OpenAlexW2066484235

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.