Evidence map›Paper›PMID 19234126›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Pathogenic adaptation of intracellular bacteria by rewiring a cis-regulatory input function.

Suzanne E Osborne, Don Walthers, Ana M Tomljenovic, David T Mulder, Uma Silphaduang, Nancy Duong, Michael J Lowden, Mark E Wickham, Ross F Waller, Linda J Kenney and 1 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 62 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Evolution of amBio · 2022
    Article
  7. Regulatory Evolution of theJournal of bacteriology · 2022
    Article
  8. Article
  9. Article
  10. Diversity inmBio · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Frontiers in microbiology · 2019
    Article
  15. Article
  16. Temporal Regulation of aMolecular & cellular proteomics : MCP · 2017
    Article
  17. Article
  18. Evolution ofFrontiers in cellular and infection microbiology · 2017
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Suzanne E OsborneThe Michael G. DeGroote Institute for Infectious Disease Research, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, ON, Canada L8N 3Z5.
Don Walthers
Ana M Tomljenovic
David T Mulder
Uma Silphaduang
Nancy Duong
Michael J Lowden
Mark E Wickham
Ross F Waller
Linda J Kenney
Brian K Coombes
McMaster University · CAUniversity of Illinois Chicago · USDartmouth College · USPublic Health Agency of Canada · CAUniversity of Melbourne · AU

Funding

MOLECULAR CHARACTERIZATION OF PORIN GENE REGULATIONR01GM058746 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENNEY, LINDA J. · 2000 to 2010
$2.3M
NIGMS NIH HHS GM-58746NIGMS NIH HHS R01 GM058746
6 · The paper itself

Abstract

The acquisition of DNA by horizontal gene transfer enables bacteria to adapt to previously unexploited ecological niches. Although horizontal gene transfer and mutation of protein-coding sequences are well-recognized forms of pathogen evolution, the evolutionary significance of cis-regulatory mutations in creating phenotypic diversity through altered transcriptional outputs is not known. We show the significance of regulatory mutation for pathogen evolution by mapping and then rewiring a cis-regulatory module controlling a gene required for murine typhoid. Acquisition of a binding site for the Salmonella pathogenicity island-2 regulator, SsrB, enabled the srfN gene, ancestral to the Salmonella genus, to play a role in pathoadaptation of S. typhimurium to a host animal. We identified the evolved cis-regulatory module and quantified the fitness gain that this regulatory output accrues for the bacterium using competitive infections of host animals. Our findings highlight a mechanism of pathogen evolution involving regulatory mutation that is selected because of the fitness advantage the new regulatory output provides the incipient clones.

Indexed as

Adaptation, PhysiologicalAnimalsBacterial ProteinsBase SequenceGene Expression Regulation, BacterialGenes, BacterialHost-Pathogen InteractionsIntracellular SpaceMiceMolecular Sequence DataMutationPromoter Regions, GeneticProtein BindingRegulatory Sequences, Nucleic AcidSalmonellaTranscription FactorsBacterial ProteinsSsrB protein, Salmonella typhimuriumTranscription Factors

Identifiers

PMID19234126
PMCPMC2645909
OpenAlexW1998847489

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.