Evidence map›Paper›PMID 19233925›Full record

ArticleJournal of bacteriology2009

Novel trans-Acting Bacillus subtilis glnA mutations that derepress glnRA expression.

Susan H Fisher, Lewis V Wray

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Glutamine synthetase and GlnR regulate nitrogen metabolism inApplied and environmental microbiology · 2023
    Article
  2. Alanine synthesized by alanine dehydrogenase enables ammonium-tolerant nitrogen fixation inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Article
  4. The Unexpected Essentiality ofFrontiers in microbiology · 2018
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Susan H FisherDepartment of Microbiology, Boston University School of Medicine, 72 East Concord Street, Boston, MA 02118-2526, USA. shfisher@bu.edu
Lewis V Wray
Boston University · US

Funding

REGULATION OF NITROGEN METABOLISM IN BACILLUS SUBTILISR01GM051127 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FISHER, SUSAN H. · 1994 to 2012
$3.8M
NIGMS NIH HHS GM051127NIGMS NIH HHS R01 GM051127
6 · The paper itself

Abstract

Bacillus subtilis contains two nitrogen transcription factors, GlnR and TnrA. The activities of GlnR and TnrA are regulated by direct protein-protein interactions with the feedback-inhibited form of glutamine synthetase (GS). To look for other factors involved in regulating GlnR activity, we isolated mutants with constitutive glnRA expression (Gln(C)). The twenty-seven Gln(C) mutants isolated in this mutant screen all contained mutations tightly linked to the glnRA operon which encodes GlnR (glnR) and GS (glnA). Four Gln(C) mutants contained mutations in the glnR gene that most likely impair the ability of GlnR to bind DNA. Three other Gln(C) mutants contained novel glnA mutations (S55F, V173I, and L174F). GlnR regulation was completely relieved in the three glnA mutants, while only modest defects in TnrA regulation were observed. In vitro enzymatic assays showed that the purified S55F mutant enzyme was catalytically defective while the V173I and L174F enzymes were highly resistant to feedback inhibition. The V173I and L174F GS proteins were found to require higher glutamine concentrations than the wild-type GS to regulate the DNA-binding activities of GlnR and TnrA in vitro. These results are consistent with a model where feedback-inhibited GS is the only cellular factor involved in regulating the activity of GlnR in B. subtilis.

Indexed as

Gene Expression Regulation, BacterialMutation, MissenseAmino Acid SubstitutionBacillus subtilisBacterial ProteinsDNA, BacterialGlutamate-Ammonia LigaseProtein BindingRepressor ProteinsTrans-ActivatorsBacterial ProteinsDNA, BacterialGlutamate-Ammonia Ligaseglutamine synthetase IRepressor ProteinsScgR protein, Bacillus subtilisTrans-Activators

Identifiers

PMID19233925
PMCPMC2668423
OpenAlexW2111432815

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.