Evidence map›Paper›PMID 19232129›Full record

ArticleBMC evolutionary biology2009

Phylogenetic diversity of stress signalling pathways in fungi.

Elissavet Nikolaou, Ino Agrafioti, Michael Stumpf, Janet Quinn, Ian Stansfield, Alistair J P Brown

Abstract read
In one paragraph

Article in BMC evolutionary biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed.

  1. Review
  2. Response of Psychrotolerant FungusInternational journal of molecular sciences · 2026
    Article
  3. Review
  4. Article
  5. Membrane Lipids and Osmolytes Rearrangements Under Cell Wall Stress inInternational journal of molecular sciences · 2025
    Article
  6. The APSES transcription factor Swi6B upregulatesApplied and environmental microbiology · 2025
    Article
  7. Article
  8. Response to Oxidative Stress inJournal of fungi (Basel, Switzerland) · 2025
    Review
  9. Article
  10. Review
  11. Article
  12. Fungal Stress Responses and the Importance of GPCRs.Journal of fungi (Basel, Switzerland) · 2025
    Review
  13. Article
  14. Regulation of Catalase Expression and Activity byJournal of fungi (Basel, Switzerland) · 2024
    Article
  15. Article
  16. Reprogramming inInternational journal of molecular sciences · 2023
    Article
  17. The Metabolite Profiling ofMetabolites · 2023
    Article
  18. Article
  19. Article
  20. Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Elissavet NikolaouAberdeen Fungal Group, School of Medical Sciences, University of Aberdeen, Institute of Medical Sciences, Foresterhill, Aberdeen, AB25 2ZD, UK. e.nikolaou@abdn.ac.uk
Ino Agrafioti
Michael Stumpf
Janet Quinn
Ian Stansfield
Alistair J P Brown

Funding

Biotechnology and Biological Sciences Research Council BB/C510391/1Biotechnology and Biological Sciences Research Council BB/D009308/1Biotechnology and Biological Sciences Research Council BB/F00513X/1Biotechnology and Biological Sciences Research Council BB/F013566/1Wellcome TrustWellcome Trust 080088
6 · The paper itself

Abstract

backgroundMicrobes must sense environmental stresses, transduce these signals and mount protective responses to survive in hostile environments. In this study we have tested the hypothesis that fungal stress signalling pathways have evolved rapidly in a niche-specific fashion that is independent of phylogeny. To test this hypothesis we have compared the conservation of stress signalling molecules in diverse fungal species with their stress resistance. These fungi, which include ascomycetes, basidiomycetes and microsporidia, occupy highly divergent niches from saline environments to plant or mammalian hosts.

resultsThe fungi displayed significant variation in their resistance to osmotic (NaCl and sorbitol), oxidative (H2O2 and menadione) and cell wall stresses (Calcofluor White and Congo Red). There was no strict correlation between fungal phylogeny and stress resistance. Rather, the human pathogens tended to be more resistant to all three types of stress, an exception being the sensitivity of Candida albicans to the cell wall stress, Calcofluor White. In contrast, the plant pathogens were relatively sensitive to oxidative stress. The degree of conservation of osmotic, oxidative and cell wall stress signalling pathways amongst the eighteen fungal species was examined. Putative orthologues of functionally defined signalling components in Saccharomyces cerevisiae were identified by performing reciprocal BLASTP searches, and the percent amino acid identities of these orthologues recorded. This revealed that in general, central components of the osmotic, oxidative and cell wall stress signalling pathways are relatively well conserved, whereas the sensors lying upstream and transcriptional regulators lying downstream of these modules have diverged significantly. There was no obvious correlation between the degree of conservation of stress signalling pathways and the resistance of a particular fungus to the corresponding stress.

conclusionOur data are consistent with the hypothesis that fungal stress signalling components have undergone rapid recent evolution to tune the stress responses in a niche-specific fashion.

Indexed as

BenzenesulfonatesCandida albicansCell WallCongo RedDNA, FungalEvolution, MolecularFungal ProteinsGene Expression Regulation, FungalGenome, FungalHydrogen PeroxideOsmotic PressureOxidative StressPhylogenySaccharomyces cerevisiaeSignal TransductionSodium ChlorideBenzenesulfonatesC.I. Fluorescent Brightening Agent 28Congo RedDNA, FungalFungal ProteinsHydrogen PeroxideSodium ChlorideSorbitolVitamin K 3

Identifiers

PMID19232129
PMCPMC2666651

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.