Evidence map›Paper›PMID 19226516›Full record

ArticleBiopolymers2009

Trifluoroethanol reveals helical propensity at analogous positions in cytoplasmic domains of three connexins.

Alfredo G Fort, David C Spray

Open access · greenAbstract read
In one paragraph

Article in Biopolymers, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Alfredo G FortDominick P. Purpura Department of Neuroscience, Albert Einstein College of Medicine of Yeshiva University, Bronx, NY 10461, USA. fort@aecom.yu.edu
David C Spray
Yeshiva University · US

Funding

Project4: INTERACTION OF AUTOPHAGIC AND HETEROPHAGIC PATHWAYS IN LIVERP01DK041918 · NIDDK · YESHIVA UNIVERSITY · PI WOLKOFF, ALLAN W · 1990 to 2012
$19.1M
THE IMPACT OF HYPOXIA ON DEVELOPMENT AND REMODELING OF CARDIC INTERCALATED DISKP01HD032573 · NICHD · YALE UNIVERSITY · PI HADDAD, GABRIEL G · 1995 to 2009
$12.1M
The Astrocyte Nexus: CX43-Protein InteractionsR01NS041282 · NINDS · YESHIVA UNIVERSITY · PI SPRAY, DAVID C · 2002 to 2011
$3.3M
Neuronal Gap Junctions: Cx36 Gating, Binding &FunctionR01MH065495 · NIMH · YESHIVA UNIVERSITY · PI SPRAY, DAVID C · 2002 to 2006
$2.0M
NICHD NIH HHS P01 HD032573NIDDK NIH HHS DK41918NIDDK NIH HHS P01 DK041918NIMH NIH HHS MH65495NIMH NIH HHS R01 MH065495NINDS NIH HHS NS41282NINDS NIH HHS R01 NS041282
6 · The paper itself

Abstract

Cytoplasmic domains of gap junction proteins (connexins) are involved in channel gating, voltage and pH sensitivity, and contain binding sites for partner proteins. However, their secondary structure is incompletely characterized and comparisons among the connexins is totally lacking. Circular dichroism (CD) was used to study the conformational properties of synthetic peptides corresponding to the highly divergent amino acid sequences of cytoplasmic domains of connexin (Cx)32, Cx36, and Cx43. We report that whereas peptides were largely unstructured in aqueous buffer, certain peptides in 30% trifluoroethanol (TFE) showed considerable helical content. These structured peptides correspond to analogous regions in each of the three connexin cytoplasmic domains. This first comparative study of conformational properties of connexin cytoplasmic domains reveals protein domains that may play similar roles in channel function and protein-protein interactions.

Indexed as

Amino Acid SequenceCircular DichroismConnexinsMolecular Sequence DataMutationProtein FoldingTrifluoroethanolConnexinsTrifluoroethanol

Identifiers

PMID19226516
PMCPMC3645883
OpenAlexW2099028084

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.