Evidence map›Paper›PMID 19225684›Full record

ArticleOrganic & biomolecular chemistry2009

Sugar nucleotide recognition by Klebsiella pneumoniae UDP-D-galactopyranose mutase: fluorinated substrates, kinetics and equilibria.

James C Errey, Maretta C Mann, Shirley A Fairhurst, Lionel Hill, Michael R McNeil, James H Naismith, Jonathan M Percy, Chris Whitfield, Robert A Field

Open access · greenAbstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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  7. Peracetylated alpha-D-glucopyranosyl fluoride and peracetylated alpha-maltosyl fluoride.Acta crystallographica. Section C, Crystal structure communications · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 3 countries.

James C ErreySchool of Chemical Sciences and Pharmacy, University of East Anglia, Norwich NR47TJ, UK.
Maretta C Mann
Shirley A Fairhurst
Lionel Hill
Michael R McNeil
James H Naismith
Jonathan M Percy
Chris Whitfield
Robert A Field
University of East Anglia · GBJohn Innes Centre · GBColorado State University · USUniversity of Guelph · CAUniversity of St Andrews · GBUniversity of Strathclyde · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/000C0618Wellcome Trust 081862
6 · The paper itself

Abstract

A series of selectively fluorinated and other substituted UDP-D-galactose derivatives have been evaluated as substrates for Klebsiella pneumoniae UDP-D-galactopyranose mutase. This enzyme, which catalyses the interconversion of the pyranose and furanose forms of galactose as its UDP adduct, is a prospective drug target for a variety of microbial infections. We show that none of the 2''-, 3''- or 6''-hydroxyl groups of UDP-D-galactopyranose are essential for substrate binding and turnover. However, steric factors appear to play an important role in limiting the range of substitutions that can be accommodated at C-2'' and C-6'' of the sugar nucleotide substrate. Attempts to invert the C-2'' stereochemistry from equatorial to axial, changing D-galacto- to D-talo-configuration, in an attempt to exploit the higher percentage of furanose at equilibrium in the talo-series, met with no turnover of substrate.

Indexed as

Anti-Bacterial AgentsDrug Delivery SystemsFluorineIntramolecular TransferasesKineticsKlebsiella pneumoniaeNucleotidesStructure-Activity RelationshipSubstrate SpecificityAnti-Bacterial AgentsFluorineIntramolecular TransferasesNucleotidesUDP-galactopyranose mutase

Identifiers

PMID19225684
PMCPMC3326532
OpenAlexW2017492018

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.