Evidence map›Paper›PMID 19225565›Full record

ArticlePloS one2009

Rapid differential diagnosis between extrapulmonary tuberculosis and focal complications of brucellosis using a multiplex real-time PCR assay.

María Isabel Queipo-Ortuño, Juan D Colmenero, Pilar Bermudez, María José Bravo, Pilar Morata

Erratum issuedOpen access · goldAbstract readEvaluation Study
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Multiplex Real-Time PCR-shortJournal of clinical microbiology · 2019
    Article
  3. Review
  4. Optimized Lysis-Extraction Method Combined WithFrontiers in microbiology · 2018
    Article
  5. Article
  6. Polymerase chain reaction-based assays for the diagnosis of human brucellosis.Annals of clinical microbiology and antimicrobials · 2014
    Review
  7. Brucellosis in low-income and middle-income countries.Current opinion in infectious diseases · 2013
    Review
  8. Establishing the diagnosis of tuberculous vertebral osteomyelitis.European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2013
    Review
  9. Article
  10. Article
  11. Microbiological diagnosis of spinal tuberculosis.International orthopaedics · 2012
    Review
  12. Review
  13. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

María Isabel Queipo-OrtuñoBiochemistry and Molecular Biology Department, Faculty of Medicine, University of Malaga, Malaga, Spain. iqueipo@uma.es
Juan D Colmenero
Pilar Bermudez
María José Bravo
Pilar Morata
Instituto de Salud Carlos III · ESUniversidad de Málaga · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundArduous to differ clinically, extrapulmonary tuberculosis and focal complications of brucellosis remain important causes of morbidity and mortality in many countries. We developed and applied a multiplex real-time PCR assay (M RT-PCR) for the simultaneous detection of Mycobacterium tuberculosis complex and Brucella spp. METHODOLOGY: Conventional microbiological techniques and M RT-PCR for M. tuberculosis complex and Brucella spp were performed on 45 clinical specimens from patients with focal complications of brucellosis or extrapulmonary tuberculosis and 26 control samples. Fragments of 207 bp and 164 bp from the conserved region of the genes coding for an immunogenic membrane protein of 31 kDa of B. abortus (BCSP31) and the intergenic region SenX3-RegX3 were used for the identification of Brucella and M. tuberculosis complex, respectively.

conclusionsThe detection limit of the M RT-PCR was 2 genomes per reaction for both pathogens and the intra- and inter-assay coefficients of variation were 0.44% and 0.93% for Brucella and 0.58% and 1.12% for Mycobacterium. M RT-PCR correctly identified 42 of the 45 samples from patients with tuberculosis or brucellosis and was negative in all the controls. Thus, the overall sensitivity, specificity, PPV and NPV values of the M RT PCR assay were 93.3%, 100%, 100% and 89.7%, respectively, with an accuracy of 95.8% (95% CI, 91.1%-100%). Since M RT-PCR is highly reproducible and more rapid and sensitive than conventional microbiological tests, this technique could be a promising and practical approach for the differential diagnosis between extrapulmonary tuberculosis and focal complications of brucellosis.

Indexed as

BrucellaBrucellosisDiagnosis, DifferentialDNA, BacterialHumansMycobacterium tuberculosisPolymerase Chain ReactionSensitivity and SpecificityTuberculosisDNA, Bacterial

Identifiers

PMID19225565
PMCPMC2639699
OpenAlexW1999375471

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.