Evidence map›Paper›PMID 19225519›Full record

ArticleNature2009

APP binds DR6 to trigger axon pruning and neuron death via distinct caspases.

Anatoly Nikolaev, Todd McLaughlin, Dennis D M O'Leary, Marc Tessier-Lavigne

RetractedAbstract readRetracted Publication
In one paragraph

Article in Nature, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 567 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
567citing papers in PubMed, 2 pooled it
62.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

567 citing papers in PubMed, 2 syntheses or guidelines pooled it, 974 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  4. Review
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  9. Article
  10. Activity-Dependent Synapse Refinement: From Mechanisms to Molecules.The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry · 2024
    Review
  11. Article
  12. Article
  13. Exploring caspase functions in mouse models.Apoptosis : an international journal on programmed cell death · 2024
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
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  20. Article

507 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Anatoly NikolaevDivision of Research, Genentech, Inc., 1 DNA Way, South San Francisco, California 94080, USA.
Todd McLaughlin
Dennis D M O'Leary
Marc Tessier-Lavigne
Genesys (United States) · USSalk Institute for Biological Studies · US

Funding

MECHANISMS GOVERNING DEVELOPMENT OF VISUAL CONNECTIONSR01EY007025 · NEI · WASHINGTON UNIVERSITY · PI O'LEARY, DENNIS D · 1986 to 2014
$8.9M
Gamma-Secretase cleavage of the p75 receptorR01AG025970 · NIA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CHAO, MOSES VICTOR · 2006 to 2016
$3.3M
NEI NIH HHS R01 EY007025NEI NIH HHS R01 EY07025NIA NIH HHS R01 AG025970
6 · The paper itself

Abstract

Naturally occurring axonal pruning and neuronal cell death help to sculpt neuronal connections during development, but their mechanistic basis remains poorly understood. Here we report that beta-amyloid precursor protein (APP) and death receptor 6 (DR6, also known as TNFRSF21) activate a widespread caspase-dependent self-destruction program. DR6 is broadly expressed by developing neurons, and is required for normal cell body death and axonal pruning both in vivo and after trophic-factor deprivation in vitro. Unlike neuronal cell body apoptosis, which requires caspase 3, we show that axonal degeneration requires caspase 6, which is activated in a punctate pattern that parallels the pattern of axonal fragmentation. DR6 is activated locally by an inactive surface ligand(s) that is released in an active form after trophic-factor deprivation, and we identify APP as a DR6 ligand. Trophic-factor deprivation triggers the shedding of surface APP in a beta-secretase (BACE)-dependent manner. Loss- and gain-of-function studies support a model in which a cleaved amino-terminal fragment of APP (N-APP) binds DR6 and triggers degeneration. Genetic support is provided by a common neuromuscular junction phenotype in mutant mice. Our results indicate that APP and DR6 are components of a neuronal self-destruction pathway, and suggest that an extracellular fragment of APP, acting via DR6 and caspase 6, contributes to Alzheimer's disease.

Indexed as

Alzheimer DiseaseAmyloid beta-Protein PrecursorAnimalsAxonsbcl-2-Associated X ProteinCaspase 3Caspase 6CaspasesCell DeathLigandsMiceNeuronsPeptide FragmentsProtein BindingReceptors, Tumor Necrosis FactorSignal TransductionAmyloid beta-Protein PrecursorBax protein, mousebcl-2-Associated X ProteinCaspase 3Caspase 6CaspasesLigandsPeptide FragmentsReceptors, Tumor Necrosis FactorTnfrsf21 protein, mouse

Identifiers

PMID19225519
PMCPMC2677572
OpenAlexW2045855955

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.