Evidence map›Paper›PMID 19225135›Full record

ArticleThe Journal of molecular diagnostics : JMD2009

A single-tube quantitative assay for mRNA levels of hormonal and growth factor receptors in breast cancer specimens.

Ayuko A Iverson, Cheryl Gillett, Paul Cane, Christopher D Santini, Thomas M Vess, Lauren Kam-Morgan, Alice Wang, Marcia Eisenberg, Charles M Rowland, Janice J Hessling and 5 more

Open access · bronzeAbstract readValidation Study
In one paragraph

Article in The Journal of molecular diagnostics : JMD, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Omics Screening for Pharmaceutical Efficacy and Safety in Clinical Practice.Journal of pharmacogenomics & pharmacoproteomics · 2012
    Article
  6. Genome-wide gene expression profiling of formalin-fixed paraffin-embedded breast cancer core biopsies using microarrays.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2011
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Ayuko A IversonBreast Pathology Laboratory, Guy's Hospital, London, United Kingdom.
Cheryl Gillett
Paul Cane
Christopher D Santini
Thomas M Vess
Lauren Kam-Morgan
Alice Wang
Marcia Eisenberg
Charles M Rowland
Janice J Hessling
Samuel E Broder
John J Sninsky
Andrew Tutt
Steven Anderson
Sheng-Yung P Chang
Alameda Hospital · USGuy's Hospital · GBResearch Triangle Park Foundation · USBreast Cancer Now · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Knowledge of estrogen receptor (ER) and progesterone receptor (PR) status has been critical in the evolution of modern targeted therapy of breast cancer and remains essential for making informed therapeutic decisions. Recently, growth factor receptor HER2/neu (ERBB2) status has made it possible to provide another form of targeted therapy linked to the overexpression of this protein. Presently, pathologists determine the receptor status in formalin-fixed, paraffin-embedded sections using subjective, semiquantitative immunohistochemistry (IHC) assays and quantitative fluorescence in situ hybridization for HER2. We developed a single-tube multiplex TaqMan (mERPR+HER2) assay to quantitate mRNA levels of ER, PR, HER2, and two housekeeping genes for breast cancer formalin-fixed, paraffin-embedded sections. Using data from the discovery sample sets, we evaluated IHC-status-dependent cutoff-point and IHC-status-independent clustering methods for the classification of receptor status and then validated these results with independent sample sets. Compared with IHC-status, the accuracies of the mERPR+HER2 assay with the cutoff-point classification method were 0.98 (95% CI: 0.97-1.00), 0.92 (95% CI: 0.88-0.95), and 0.97 (95% CI: 0.95-0.99) for ER, PR, and HER2, respectively, for the validation sets. Furthermore, the areas under the receiver operating-characteristic curves were 0.997 (95% CI: 0.994-1.000), 0.967 (95% CI: 0.949-0.985), and 0.968 (95% CI: 0.915-1.000) for ER, PR, and HER2, respectively. This multiplex assay provides a sensitive and reliable method to quantitate hormonal and growth factor receptors.

Indexed as

Breast NeoplasmsErb-b2 Receptor Tyrosine KinasesFemaleFormaldehydeHumansMolecular Diagnostic TechniquesParaffin EmbeddingReceptors, EstrogenReceptors, ProgesteroneReproducibility of ResultsRNA, MessengerSensitivity and SpecificityTissue FixationUp-RegulationErb-b2 Receptor Tyrosine KinasesFormaldehydeReceptors, EstrogenReceptors, ProgesteroneRNA, Messenger

Identifiers

PMID19225135
PMCPMC2665861
OpenAlexW2067963963

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.