Evidence map›Paper›PMID 19225007›Full record

ArticleJournal of virology2009

Mutational analysis of conserved amino acids in the influenza A virus nucleoprotein.

Zejun Li, Tokiko Watanabe, Masato Hatta, Shinji Watanabe, Asuka Nanbo, Makoto Ozawa, Satoshi Kakugawa, Masayuki Shimojima, Shinya Yamada, Gabriele Neumann and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 109 citations in OpenAlex.

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  20. Frustration and fidelity in influenza genome assembly.Journal of the Royal Society, Interface · 2019
    Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 2 countries.

Zejun LiDepartment of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
Tokiko Watanabe
Masato Hatta
Shinji Watanabe
Asuka Nanbo
Makoto Ozawa
Satoshi Kakugawa
Masayuki Shimojima
Shinya Yamada
Gabriele Neumann
Yoshihiro Kawaoka
University of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nucleoprotein (NP), which has multiple functions during the virus life cycle, possesses regions that are highly conserved among influenza A, B, and C viruses. To better understand the roles of highly conserved NP amino acids in viral replication, we conducted a comprehensive mutational analysis. Using reverse genetics, we attempted to generate 74 viruses possessing mutations at conserved amino acids of NP. Of these, 48 mutant viruses were successfully rescued; 26 mutants were not viable, suggesting a critical role of the respective NP amino acids in viral replication. To identify the step(s) in the viral life cycle that is impaired by these NP mutations, we examined viral-genome replication/transcription, NP localization, and incorporation of viral-RNA segments into progeny virions. We identified 15 amino acid substitutions in NP that inhibited viral-genome replication and/or transcription, resulting in significant growth defects of viruses possessing these substitutions. We also found several NP mutations that affected the efficient incorporation of multiple viral-RNA (vRNA) segments into progeny virions even though a single vRNA segment was incorporated efficiently. The respective conserved amino acids in NP may thus be critical for the assembly and/or incorporation of sets of eight vRNA segments.

Indexed as

Amino AcidsAmino Acid SequenceAnimalsCell LineConserved SequenceCrystallography, X-RayDogsHumansInfluenza A Virus, H1N1 SubtypeModels, MolecularMolecular Sequence DataMutationNucleocapsid ProteinsPhenotypeProtein Structure, TertiaryRNA-Binding ProteinsAmino AcidsNP protein, Influenza A virusNucleocapsid ProteinsRNA-Binding ProteinsRNA, ViralViral Core Proteins

Identifiers

PMID19225007
PMCPMC2668439
OpenAlexW2165459383

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.