Evidence map›Paper›PMID 19224997›Full record

ArticleJournal of virology2009

Role of defective Oct-2 and OCA-B expression in immunoglobulin production and Kaposi's sarcoma-associated herpesvirus lytic reactivation in primary effusion lymphoma.

Daniel L Di Bartolo, Elizabeth Hyjek, Shannon Keller, Ilaria Guasparri, Hongyu Deng, Ren Sun, Amy Chadburn, Daniel M Knowles, Ethel Cesarman

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Evidence for a Mesothelial Origin of Body Cavity Effusion Lymphomas.Journal of the National Cancer Institute · 2017
    Article
  6. Review
  7. Octamer-binding transcription factors: genomics and functions.Frontiers in bioscience (Landmark edition) · 2013
    Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Daniel L Di BartoloDepartment of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY 10065, USA.
Elizabeth Hyjek
Shannon Keller
Ilaria Guasparri
Hongyu Deng
Ren Sun
Amy Chadburn
Daniel M Knowles
Ethel Cesarman
Cornell University · USUniversity of California, Los Angeles · US

Funding

Survival Signals in AIDS LymphomasR01CA068939 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CESARMAN, ETHEL · 2001 to 2010
$2.6M
KAPOSIS SARCOMA ASSOCIATED VIRUS IN AIDS/LYMPHOMASR29CA068939 · NCI · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CESARMAN, ETHEL · 1995 to 1999
–
NCI NIH HHS CA68939NCI NIH HHS R01 CA068939NCI NIH HHS R29 CA068939
6 · The paper itself

Abstract

Primary effusion lymphoma (PEL) is a distinct type of B-cell non-Hodgkin lymphoma characterized by the presence of Kaposi's sarcoma-associated herpesvirus (KSHV/human herpesvirus 8). Despite having a genotype and gene expression signature of highly differentiated B cells, PEL does not usually express surface or cytoplasmic immunoglobulin (Ig). We show the lack of Oct-2 and OCA-B transcription factors to be responsible, at least in part, for this defect in Ig production. Like Ig genes, ORF50, the key regulator of the switch from latency to lytic reactivation, contains an octamer motif within its promoter. We therefore examined the impact of Oct-2 and OCA-B on ORF50 activation. The binding of Oct-1 to the ORF50 promoter has been shown to significantly enhance ORF50 transactivation. We found that Oct-2, on the other hand, inhibited ORF50 expression and consequently lytic reactivation by competing with Oct-1 for the octamer motif in the ORF50 promoter. Our data suggest that Oct-2 downregulation in infected cells would be favorable to KSHV in allowing for efficient viral reactivation.

Indexed as

Antibody FormationCell LineGene Expression RegulationHerpesvirus 8, HumanHumansImmediate-Early ProteinsImmunoglobulinsLymphoma, Primary EffusionOctamer Transcription Factor-2Protein BindingTrans-ActivatorsTranscriptional ActivationVirus ActivationImmediate-Early ProteinsImmunoglobulinsOctamer Transcription Factor-2Rta protein, Human herpesvirus 8Trans-Activators

Identifiers

PMID19224997
PMCPMC2668464
OpenAlexW2056469524

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.