Evidence map›Paper›PMID 19223443›Full record

ArticleRNA (New York, N.Y.)2009

The cytoskeleton-associated Ena/VASP proteins are unanticipated partners of the PMR1 mRNA endonuclease.

Yong Peng, Elizabeth L Murray, Madhubanti Sarkar, Xiaoqiang Liu, Daniel R Schoenberg

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Regulation of cytoplasmic mRNA decay.Nature reviews. Genetics · 2012
    Review
  5. Article
  6. Review
  7. Mechanisms of endonuclease-mediated mRNA decay.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Yong PengDepartment of Molecular and Cellular Biochemistry, The Ohio State University, Columbus, 43210, USA.
Elizabeth L Murray
Madhubanti Sarkar
Xiaoqiang Liu
Daniel R Schoenberg
The Ohio State University · USInstitute of Genetics and Developmental Biology · CN

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Tasleem J Padamsee · 1985 to 2026
$132.3M
Hormonal Regulation of mRNA StabilityR01GM038277 · NIGMS · OHIO STATE UNIVERSITY · PI SCHOENBERG, DANIEL R. · 1987 to 2013
$4.8M
NCI NIH HHS P30 CA016058NCI NIH HHS P30 CA16058NIGMS NIH HHS R01 GM038277
6 · The paper itself

Abstract

The PMR1 mRNA endonuclease catalyzes the selective decay of a limited number of mRNAs. It participates in multiple complexes, including one containing c-Src, its activating kinase, and one containing its substrate mRNA. This study used tandem affinity purification (TAP) chromatography to identify proteins in HeLa cell S100 associated with the mature 60-kDa form of Xenopus PMR1 (xPMR60). Unexpectedly, this identified a number of cytoskeleton-associated proteins, most notably the Ena family proteins mammalian Enabled (Mena) and vasodilator-stimulated phosphoprotein (VASP). These are regulators of actin dynamics that distribute throughout the cytoplasm and concentrate along the leading edge of the cell. xPMR60 interacts with Mena and VASP in vivo, overexpression of Mena has no impact on mRNA decay, and Mena and VASP are recovered together with xPMR60 in each of the major complexes of PMR1-mRNA decay. In a wound-healing experiment induced expression of active xPMR60 in stably transfected cells resulted in a twofold increase in cell motility compared with uninduced cells or cells expressing inactive xPMR60 degrees . Under these conditions xPMR60 colocalizes with VASP along one edge of the cell.

Indexed as

ActinsAnimalsCell Adhesion MoleculesCell MovementChlorocebus aethiopsChromatography, AffinityCOS CellsEndoribonucleasesHeLa CellsHumansMicrofilament ProteinsPhosphoproteinsRNA StabilityTransfectionVasodilator-Stimulated PhosphoproteinXenopus ProteinsActinsCell Adhesion MoleculesEndoribonucleasesMicrofilament ProteinsPhosphoproteinsPMR-1 polysomal ribonuclease 1, Xenopus laevisVasodilator-Stimulated PhosphoproteinXenopus Proteins

Identifiers

PMID19223443
PMCPMC2661838
OpenAlexW2118843681

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.