Evidence map›Paper›PMID 19221000›Full record

ArticleCarcinogenesis2009

BTG3 tumor suppressor gene promoter demethylation, histone modification and cell cycle arrest by genistein in renal cancer.

Shahana Majid, Altaf A Dar, Ardalan E Ahmad, Hiroshi Hirata, Kazumori Kawakami, Varahram Shahryari, Sharanjot Saini, Yuichiro Tanaka, Angela V Dahiya, Gaurav Khatri and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Carcinogenesis, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

104 citing papers in PubMed, 211 citations in OpenAlex.

  1. Review
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  4. Article
  5. Article
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  8. Article
  9. Review
  10. Article
  11. Review
  12. Methyl Group Metabolism in Differentiation, Aging, and Cancer.International journal of molecular sciences · 2022
    Review
  13. Review
  14. RSC advances · 2022
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Review

44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shahana MajidDepartment of Urology, Veterans Affairs Medical Center and University of California, San Francisco, San Francisco, CA 94121, USA.
Altaf A Dar
Ardalan E Ahmad
Hiroshi Hirata
Kazumori Kawakami
Varahram Shahryari
Sharanjot Saini
Yuichiro Tanaka
Angela V Dahiya
Gaurav Khatri
Rajvir Dahiya
University of California, San Francisco · USSan Francisco VA Medical Center · US

Funding

Genistein and Prostate CancerR01CA111470 · NCI · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI DAHIYA, RAJVIR · 2006 to 2010
$1.4M
UROLOGICAL RESEARCH TRAINING PROGRAMT32DK007790 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DAHIYA, RAJVIR · 2000 to 2011
$812k
NCI NIH HHS R01CA111470NIDDK NIH HHS T32DK007790
6 · The paper itself

Abstract

BTG3/ANA/APRO4 has been reported to be a tumor suppressor gene in some malignancies. It constitutes important negative regulatory mechanism for Src-mediated signaling, a negative regulator of the cell cycle and inhibits transcription factor E2F1. We report that BTG3 is downregulated in renal cancer and that the mechanism of inactivation is through promoter hypermethylation. Quantitative real-time polymerase chain reaction (PCR) showed that BTG3 was downregulated in cancer tissues and cells. Genistein and 5-aza-2'-deoxycytidine (5Aza-C) induced BTG3 messenger RNA (mRNA) expression in A498, ACHN and HEK-293 renal cell carcinoma (RCC) cell lines. Bisulfite-modified PCR and DNA sequencing results showed complete methylation of BTG3 promoter in tumor samples and cancer cell lines. Genistein and 5Aza-C treatment significantly decreased promoter methylation, reactivating BTG3 expression. Chromatin immunoprecipitation assay revealed that genistein and 5Aza-C increased levels of acetylated histones 3, 4, 2H3K4, 3H3K4 and RNA polymerase II at the BTG3 promoter indicative of active histone modifications. Enzymatic assays showed genistein and 5Aza-C decreased DNA Methyltransferase, methyl-CpG-binding domain 2 activity and increased HAT activity. Cell cycle and 3-(4,5-dimethylthiazole-2-yl)-2,5-biphenyl tetrazolium bromide cell proliferation assays showed that genistein has antiproliferative effect on cancer cell growth through induction of cell cycle arrest. This is the first report to show that BTG3 is epigenetically silenced in RCC and can be reactivated by genistein-induced promoter demethylation and active histone modification. Genistein had similar effects to that of 5Aza-C, which is a potent demethylating agent with high toxicity and instability. Genistein being a natural, non-toxic, dietary isoflavone is effective in retarding the growth of RCC cells, making it a promising candidate for epigenetic therapy in renal carcinoma.

Indexed as

DNA MethylationAnticarcinogenic AgentsAzacitidineCell CycleCell Cycle ProteinsCell SurvivalChromatinChromatin ImmunoprecipitationDecitabineDNA-Binding ProteinsDNA Modification MethylasesEnzyme InhibitorsGenes, Tumor SuppressorGenisteinHistonesHumansAnticarcinogenic AgentsAzacitidineBTG3 protein, humanCell Cycle ProteinsChromatinDecitabineDNA-Binding ProteinsDNA Modification MethylasesEnzyme InhibitorsGenisteinHistonesMBD2 proteinProteinsRNA, Messenger

Identifiers

PMID19221000
PMCPMC2664457
OpenAlexW2156559492

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.