Evidence map›Paper›PMID 1922061›Full record

ArticleMolecular and cellular biology1991

Identification and characterization of a T-cell-specific enhancer adjacent to the murine CD4 gene.

S Sawada, D R Littman

Abstract read
In one paragraph

Article in Molecular and cellular biology, 1991. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 116 citations in OpenAlex.

  1. A Bcl11bFrontiers in immunology · 2024
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  11. Transcription factor AP4 modulates reversible and epigenetic silencing of the Cd4 gene.Proceedings of the National Academy of Sciences of the United States of America · 2011
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  16. Development of all CD4 T lineages requires nuclear factor TOX.The Journal of experimental medicine · 2008
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

S SawadaHoward Hughes Medical Institute, University of California, San Francisco 94143-0414.
D R Littman
Howard Hughes Medical Institute · US

Funding

GENE EXPRESSION IN T LYMPHOCYTESR01AI023513 · NIAID · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI LITTMAN, DAN R · 1986 to 1994
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NIAID NIH HHS AI 23513
6 · The paper itself

Abstract

Expression of the CD4 and CD8 glycoproteins is a tightly regulated process tied to the maturation of functionally distinct classes of thymocytes. Therefore, understanding of the mechanism of expression of the genes encoding CD4 and CD8 is likely to yield important insight into regulation of the differentiated functions of T cells. Here, we report the identification of a T-cell-specific enhancer in a DNase I-hypersensitive region about 13 kb 5' of the transcription initiation site of the murine CD4 gene. Within the minimal enhancer element, at least three nuclear protein binding sites were identified by DNase I footprint analysis. One site contains the consensus motif for TCF-1 alpha/LEF-1, a recently identified HMG box transcription factor primarily expressed in pre-B and T cells. By Southwestern (DNA-protein) blotting and binding competition analyses, the protein binding to this site was found to be indistinguishable from TCF-1 alpha/LEF-1. Mutagenesis of this site resulted in loss of factor binding but had a relatively minor effect on enhancer activity. In contrast, mutations in another site, containing two consensus binding motifs for basic helix-loop-helix proteins, abolished factor binding and dramatically reduced enhancer activity. None of the protein binding sites had activity on its own, suggesting that the CD4 enhancer requires the interaction of multiple regulatory sites.

Indexed as

Enhancer Elements, GeneticAnimalsBase SequenceCD4 AntigensCell LineCell NucleusChloramphenicol O-AcetyltransferaseCloning, MolecularCosmidsDeoxyribonuclease IDNA ProbesGenetic VectorsLuciferasesMiceMolecular Sequence DataMutagenesis, Site-DirectedCD4 AntigensChloramphenicol O-AcetyltransferaseDeoxyribonuclease IDNA ProbesLuciferases

Identifiers

PMID1922061
PMCPMC361920
OpenAlexW1954521430

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.