Evidence map›Paper›PMID 19215787›Full record

ArticleCancer genetics and cytogenetics2009

Uniparentalism in sporadic colorectal cancer is independent of imprint status, and coordinate for chromosomes 14 and 18.

Huferesh K Darbary, Smitha S Dutt, Sheila J Sait, Norma J Nowak, Roy E Heinaman, Daniel L Stoler, Garth R Anderson

Open access · greenAbstract readComparative Study
In one paragraph

Article in Cancer genetics and cytogenetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Huferesh K DarbaryDepartment of Cancer Biology, Roswell Park Cancer Institute, Elm and Carlton Streets, Buffalo, NY 14263, USA.
Smitha S Dutt
Sheila J Sait
Norma J Nowak
Roy E Heinaman
Daniel L Stoler
Garth R Anderson
Roswell Park Comprehensive Cancer Center · US

Funding

GENOMIC INSTABILITY IN HUMAN COLORECTAL CANCERR01CA074127 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI ANDERSON, GARTH R · 1998 to 2005
$1.4M
NCI NIH HHS R01 CA074127NCI NIH HHS R01CA74018
6 · The paper itself

Abstract

Our previous allelotyping studies of 59 sporadic colorectal cancers revealed that loss of heterozygosity is most frequent for regions of chromosomes 14 and 18. Yet subsequent BAC microarray comparative genomic hybridization studies of the same tumor DNAs showed no corresponding pattern of copy number alteration for chromosome 14. To clarify this apparent discrepancy, we utilized hybridization to SNP microarrays; this revealed frequent uniparentalism for chromosome 14 and for chromosome 18. Based on the BAC array results combined with fluorescent in situ hybridization data, it was evident that uniparental disomy was occurring in many colorectal cancers as well as in additional chromosomes, and often coordinately involved chromosomes 14 and 18. Further studies examined the possibility that uniparentalism was directed towards the selection for imprinted genes, but no association with imprinting was observed.

Indexed as

Chromosomes, Human, Pair 14Chromosomes, Human, Pair 18Uniparental DisomyCarcinomaColorectal NeoplasmsComparative Genomic HybridizationDNA MethylationGenomic ImprintingGenomic InstabilityHumansKaryotypingLoss of HeterozygosityOligonucleotide Array Sequence AnalysisPolymorphism, Single Nucleotide

Identifiers

PMID19215787
PMCPMC2666006
OpenAlexW2139544809

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.