Evidence map›Paper›PMID 19211935›Full record

ArticleBlood2009

MicroRNA-29b induces global DNA hypomethylation and tumor suppressor gene reexpression in acute myeloid leukemia by targeting directly DNMT3A and 3B and indirectly DNMT1.

Ramiro Garzon, Shujun Liu, Muller Fabbri, Zhongfa Liu, Catherine E A Heaphy, Elisa Callegari, Sebastian Schwind, Jiuxia Pang, Jianhua Yu, Natarajan Muthusamy and 12 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Blood, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01927354 (Observational Study on the Investigation of the Molecular Mechanism and Clinical Significance of the Interplay Between Twist1 and Other EMT Regulators Through microRNA-29 Family.), which is not on this map. Cited by 422 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
422citing papers in PubMed, 1 pooled it
29.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01927354 unknown statusnot on this mapstarted 2012, after this paper: background citation

Observational Study on the Investigation of the Molecular Mechanism and Clinical Significance of the Interplay Between Twist1 and Other EMT Regulators Through microRNA-29 Family.

TypeobservationalSponsorNational Taiwan University HospitalRan2012 to 2014Enrolled100ConditionsHead-and-Neck Squamous Cell Carcinoma
3 · Its place in the literature

Who cites it

422 citing papers in PubMed, 1 synthesis or guideline pooled it, 769 citations in OpenAlex.

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  5. TheHematology reports · 2026
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362 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 1 country.

Ramiro GarzonDepartment of Medicine, Ohio State University, Columbus, 43210, USA.
Shujun Liu
Muller Fabbri
Zhongfa Liu
Catherine E A Heaphy
Elisa Callegari
Sebastian Schwind
Jiuxia Pang
Jianhua Yu
Natarajan Muthusamy
Violaine Havelange
Stefano Volinia
William Blum
Laura J Rush
Danilo Perrotti
Michael Andreeff
Clara D Bloomfield
John C Byrd
Kenneth Chan
Lai-Chu Wu
Carlo M Croce
Guido Marcucci
Comprehensive Blood & Cancer Center · USThe Ohio State University · USThe University of Texas MD Anderson Cancer Center · US

Funding

Tissue CoreP01CA081534 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KIPPS, THOMAS J · 2000 to 2016
$59.5M
Structural Analysis of TCL-1 and MTCP-1 ProteinsP01CA076259 · NCI · THOMAS JEFFERSON UNIVERSITY · PI CROCE, CARLO M · 1999 to 2003
$6.1M
PHARMACOLOGICAL MODULATION OF EPIGENETIC CHANTGES IN AMLR01CA102031 · NCI · OHIO STATE UNIVERSITY · PI GUZMAN, MONICA L, MARCUCCI, GUIDO · 2004 to 2017
$3.8M
NCI NIH HHS P01 CA076259NCI NIH HHS P01 CA081534NCI NIH HHS P01-CA76259NCI NIH HHS P01-CA81534NCI NIH HHS R01 CA102031NCI NIH HHS R01-CA102031
6 · The paper itself

Abstract

Aberrant DNA hypermethylation contributes to myeloid leukemogenesis by silencing structurally normal genes involved in hematopoiesis. MicroRNAs (miRNAs) are noncoding RNAs that regulate gene expression by targeting protein-coding mRNAs. Recently, miRNAs have been shown to play a role as both targets and effectors in gene hypermethylation and silencing in malignant cells. In the current study, we showed that enforced expression of miR-29b in acute myeloid leukemia cells resulted in marked reduction of the expression of DNA methyltransferases DNMT1, DNMT3A, and DNMT3B at both RNA and protein levels. This in turn led to decrease in global DNA methylation and reexpression of p15(INK4b) and ESR1 via promoter DNA hypomethylation. Although down-regulation of DNMT3A and DNMT3B was the result of a direct interaction of miR-29b with the 3' untranslated regions of these genes, no predicted miR-29b interaction sites were found in the DNMT1 3' untranslated regions. Further experiments revealed that miR-29b down-regulates DNMT1 indirectly by targeting Sp1, a transactivator of the DNMT1 gene. Altogether, these data provide novel functional links between miRNAs and aberrant DNA hypermethylation in acute myeloid leukemia and suggest a potentially therapeutic use of synthetic miR-29b oligonucleotides as effective hypomethylating compounds.

Indexed as

Gene Expression Regulation, LeukemicGenes, Tumor Suppressor3' Untranslated RegionsAcute DiseaseCell DifferentiationCell Line, TumorCyclin-Dependent Kinase Inhibitor p15DNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3ADNA Methyltransferase 3BDown-RegulationEnzyme InductionEstrogen Receptor alphaGenetic Vectors3' Untranslated RegionsCyclin-Dependent Kinase Inhibitor p15DNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNA Methyltransferase 3BDNMT1 protein, humanDNMT3A protein, humanESR1 protein, humanEstrogen Receptor alphaMicroRNAsNeoplasm ProteinsRNA, NeoplasmSp1 Transcription Factor

Identifiers

PMID19211935
PMCPMC2710934
OpenAlexW2034325228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.