Evidence map›Paper›PMID 19209859›Full record

ArticleJournal of the American Chemical Society2009

Kinetics of oxidation of benzphetamine by compounds I of cytochrome P450 2B4 and its mutants.

Xin Sheng, Haoming Zhang, Sang-Choul Im, John H Horner, Lucy Waskell, Paul F Hollenberg, Martin Newcomb

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

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  7. Reactive intermediates in cytochrome p450 catalysis.The Journal of biological chemistry · 2013
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Xin ShengDepartment of Chemistry, University of Illinois at Chicago, Chicago, Illinois 60607, USA.
Haoming Zhang
Sang-Choul Im
John H Horner
Lucy Waskell
Paul F Hollenberg
Martin Newcomb
University of Michigan–Ann Arbor · USUniversity of Illinois Chicago · US

Funding

HEMOPROTEIN-CATALYZED OXYGENATIONS OF CARCINOGENSR01CA016954 · NCI · WAYNE STATE UNIVERSITY · PI HOLLENBERG, PAUL F. · 1986 to 2011
$4.3M
PARTICIPATION OF CYTOCHROME B5 IN ANESTHETIC METABOLISMR01GM035533 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WASKELL, LUCY A · 1985 to 2010
$2.7M
MECHANISTIC PROBES FOR ENZYME-CATALYZED OXIDATIONSR01GM048722 · NIGMS · WAYNE STATE UNIVERSITY · PI NEWCOMB, MARTIN E · 1993 to 2010
$2.6M
HEMOPROTEIN-CATALYZED OXYGENATIONS OF CARCINOGENSR37CA016954 · NCI · WAYNE STATE UNIVERSITY · PI HOLLENBERG, PAUL F. · 1988 to 1995
–
NCI NIH HHS CA16954NCI NIH HHS R01 CA016954NIGMS NIH HHS GM35533NIGMS NIH HHS GM48722NIGMS NIH HHS R01 GM035533NIGMS NIH HHS R01 GM048722
6 · The paper itself

Abstract

Cytochromes P450 are ubiquitous heme-containing enzymes that catalyze a wide range of reactions in nature including many oxidation reactions. The active oxidant species in P450 enzymes are widely thought to be iron(IV)-oxo porphyrin radical cations, termed Compound I species, but these intermediates have not been observed under turnover conditions. We prepared Compounds I of the mammalian hepatic P450 enzyme CYP2B4 and three mutants (E301Q, T302A, and F429H) by laser flash photolysis of the Compound II species that, in turn, were prepared by reaction of the resting enzymes with peroxynitrite. The PN treatment resulted in a small amount of nitration of the P450 as determined by mass spectrometry but no change in reactivity of the P450 in a test reaction. CYP2B4 Compound I oxidized benzphetamine to norbenzphetamine in high yield in bulk studies. In direct kinetic studies of benzphetamine oxidations, Compounds I displayed saturation kinetics with similar binding equilibrium constants (K(bind)) for each. The first-order oxidation rate constants (k(ox)) were comparable for Compounds I of CYP2B4, the E301Q mutant, and the T302A mutant, whereas the k(ox) for Compound I of the F429H mutant was reduced by a factor of 2. CYP119 Compound I, studied for comparison purposes, reacted with benzphetamine with a binding constant that was nearly an order of magnitude smaller than that of CYP2B4 but a rate constant that was similar. Substrate binding constants for P450 Compound I are important for controlling overall rates of oxidation reactions, and the intrinsic reactivities of Compounds I from various P450 enzymes are comparable.

Indexed as

Archaeal ProteinsAryl Hydrocarbon HydroxylasesBenzphetamineChromatography, High Pressure LiquidCytochrome P-450 Enzyme SystemCytochrome P450 Family 2KineticsModels, MolecularOxidation-ReductionPhotochemical ProcessesPhotolysisSpectrometry, Mass, Electrospray IonizationSpectrophotometry, UltravioletArchaeal ProteinsAryl Hydrocarbon HydroxylasesBenzphetamineCYP119 protein, Sulfolobus solfataricuscytochrome P-450 CYP2B4 (rabbit)Cytochrome P-450 Enzyme SystemCytochrome P450 Family 2

Identifiers

PMID19209859
PMCPMC2765530
OpenAlexW1979616448

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.