Evidence map›Paper›PMID 19206210›Full record

ArticleBiochemistry2009

Conserved rhodopsin intradiscal structural motifs mediate stabilization: effects of zinc.

Scott Gleim, Aleksandar Stojanovic, Eric Arehart, Daniel Byington, John Hwa

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Zinc in eye health, retinal biology and disease.Progress in retinal and eye research · 2025
    Review
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Scott GleimDepartment of Pharmacology, Dartmouth Medical School, Hanover, New Hampshire 03755, USA.
Aleksandar Stojanovic
Eric Arehart
Daniel Byington
John Hwa
Dartmouth College · US

Funding

Pharmacogenetics of the human prostacyclin receptor.R01HL074190 · NHLBI · YALE UNIVERSITY · PI HWA, JOHN · 2004 to 2013
$3.3M
NHLBI NIH HHS R01 HL074190NHLBI NIH HHS R01 HL074190-01
6 · The paper itself

Abstract

Retinitis pigmentosa (RP), a neurodegenerative disorder, can arise from single point mutations in rhodopsin, leading to a cascade of protein instability, misfolding, aggregation, rod cell death, retinal degeneration, and ultimately blindness. Divalent cations, such as zinc and copper, have allosteric effects on misfolded aggregates of comparable neurodegenerative disorders including Alzheimer disease, prion diseases, and ALS. We report that two structurally conserved low-affinity zinc coordination motifs, located among a cluster of RP mutations in the intradiscal loop region, mediate dose-dependent rhodopsin destabilization. Disruption of native interactions involving histidines 100 and 195, through site-directed mutagenesis or exogenous zinc coordination, results in significant loss of receptor stability. Furthermore, chelation with EDTA stabilizes the structure of both wild-type rhodopsin and the most prevalent rhodopsin RP mutation, P(23)H. These interactions suggest that homeostatic regulation of trace metal concentrations in the rod outer segment of the retina may be important both physiologically and for an important cluster of RP mutations. Furthermore, with a growing awareness of allosteric zinc binding domains on a diverse range of GPCRs, such principles may apply to many other receptors and their associated diseases.

Indexed as

Conserved SequenceAmino Acid MotifsAmino Acid SequenceChelating AgentsCrystallography, X-RayHistidineHumansHydrogen BondingMolecular Sequence DataMutant ProteinsMutationOpsinsProtein StabilityRetinitis PigmentosaRhodopsinSequence Analysis, ProteinChelating AgentsHistidineMutant ProteinsOpsinsRhodopsinZinc

Identifiers

PMID19206210
PMCPMC2765562
OpenAlexW1979227730

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.