Evidence map›Paper›PMID 19206148›Full record

ArticleHepatology (Baltimore, Md.)2009

Age-related decrease in proteasome expression contributes to defective nuclear factor-kappaB activation during hepatic ischemia/reperfusion.

Nadine Huber, Nozomu Sakai, Thorsten Eismann, Thomas Shin, Satoshi Kuboki, John Blanchard, Rebecca Schuster, Michael J Edwards, Hector R Wong, Alex B Lentsch

Open access · greenAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. 1,4-dihydropyridine derivatives increase mRNA expression ofArhiv za higijenu rada i toksikologiju · 2021
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Proteasome and Organs Ischemia-Reperfusion Injury.International journal of molecular sciences · 2017
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Association analyses suggest the effects of RANK and RANKL on age at menarche in Chinese women.Climacteric : the journal of the International Menopause Society · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Nadine HuberLaboratory of Trauma, Sepsis and Inflammation Research, Department of Surgery, University of Cincinnati, Cincinnati, OH 45267-0558, USA.
Nozomu Sakai
Thorsten Eismann
Thomas Shin
Satoshi Kuboki
John Blanchard
Rebecca Schuster
Michael J Edwards
Hector R Wong
Alex B Lentsch
University of Cincinnati · USCincinnati Children's Hospital Medical Center · US

Funding

REGULATION OF HEPATIC ISCHEMIA/REPERFUSION INJURYR01DK056029 · NIDDK · UNIVERSITY OF LOUISVILLE · PI LENTSCH, ALEX B. · 2000 to 2018
$6.0M
Genomic analysis of pediatric SIRS and septic shockR01GM064619 · NIGMS · CINCINNATI CHILDRENS HOSP MED CTR · PI WONG, HECTOR R. · 2003 to 2009
$3.0M
Age Effects on Liver Inflammation and InjuryR01AG025881 · NIA · UNIVERSITY OF CINCINNATI · PI LENTSCH, ALEX B. · 2005 to 2014
$3.0M
NIA NIH HHS AG025881NIA NIH HHS R01 AG025881NIDDK NIH HHS DK56029NIDDK NIH HHS R01 DK056029NIGMS NIH HHS GM064619NIGMS NIH HHS R01 GM064619
6 · The paper itself

Abstract

Hepatic ischemia/reperfusion (I/R) leads to liver injury and dysfunction through the initiation of a biphasic inflammatory response that is regulated by the transcription factor nuclear factor kappaB (NF-kappaB). We have previously shown that there is an age-dependent difference in the injury response to hepatic I/R in mice that correlates with divergent activation of NF-kappaB such that young mice have greater NF-kappaB activation, but less injury than old mice. In this study, we investigated the mechanism by which age alters the activation of NF-kappaB in the liver during I/R. Young (4-5 weeks) and old (12-14 months) mice underwent partial hepatic I/R. Livers were obtained for RNA microarray analysis and protein expression assays. Using microarray analysis, we identified age-dependent differences in the expression of genes related to protein ubiquitinylation and the proteasome. In old mice, genes that are involved in the ubiquitin-proteasome pathway were significantly down-regulated during I/R. Consistent with these findings, expression of a critical proteasome subunit, non-adenosine triphosphatase 4 (PSMD4), was reduced in old mice. Expression of the NF-kappaB inhibitory protein, IkappaB alpha, was increased in old mice and was greatly phosphorylated and ubiquitinylated. The data provide strong evidence that the age-related defect in hepatic NF-kappaB signaling during I/R is a result of decreased expression of PSMD4, a proteasome subunit responsible for recognition and recruitment of ubiquitinylated substrates to the proteasome. It appears that decreased PSMD4 expression prevents recruitment of phosphorylated and ubiquitinylated IkappaB alpha to the proteasome, resulting in a defect in NF-kappaB activation.

Indexed as

AgingAnimalsCarrier ProteinsGene Expression ProfilingGene Regulatory NetworksHepatocytesI-kappa B ProteinsLiverMaleMiceMice, Inbred C57BLNF-kappa BNF-KappaB Inhibitor alphaOligonucleotide Array Sequence AnalysisProteasome Endopeptidase ComplexReperfusion InjuryCarrier ProteinsI-kappa B ProteinsNF-kappa BNF-KappaB Inhibitor alphaNfkbia protein, mouseProteasome Endopeptidase ComplexPsmd4 protein, mouseRNA-Binding Proteins

Identifiers

PMID19206148
PMCPMC2695826
OpenAlexW2067657100

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.