Evidence map›Paper›PMID 19201969›Full record

ArticleApplied and environmental microbiology2009

High-throughput bioluminescence-based mutant screening strategy for identification of bacterial virulence genes.

Attila Karsi, Nagihan Gülsoy, Erin Corb, Pradeep R Dumpala, Mark L Lawrence

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Attila KarsiDepartment of Basic Sciences, College of Veterinary Medicine, Mississippi State University, Mississippi State, Mississippi 39762, USA. karsi@cvm.msstate.edu
Nagihan Gülsoy
Erin Corb
Pradeep R Dumpala
Mark L Lawrence
Mississippi State University · USMarmara University · TR

Funding

SUMMER RESEARCH EXPERIENCE FOR VETERINARY STUDENTS (T35)T35RR007071 · NCRR · MISSISSIPPI STATE UNIVERSITY · PI LAWRENCE, MARK L · 2001 to 2010
$618k
NCRR NIH HHS 5T35RR007071NCRR NIH HHS T35 RR007071
6 · The paper itself

Abstract

A high-throughput bioluminescence screening procedure for identification of virulence genes in bacteria was developed and applied to the fish pathogen Edwardsiella ictaluri. A random transposon mutant library expressing bioluminescence was constructed and robotically arrayed on 384-well plates. Mutants were cultivated and mixed with catfish serum and neutrophils in 96-well plates, and bioluminescence was used to detect mutants that are more susceptible to killing by these host factors. The virulence and vaccine efficacy of selected mutants were determined in channel catfish. Transposon insertion sites in 13 mutants attenuated in the natural host were mapped to the E. ictaluri genome. Ten unique genes were mutated, including genes encoding a negative regulator of sigmaE activity, a glycine cleavage system protein, tricarboxylic acid cycle enzymes, an O polysaccharide biosynthesis enzyme, proteins encoded on the native plasmid pEI1, and a fimbrial chaperon protein. Three of these mutants were found to have potential as live attenuated vaccines. This study demonstrates a novel application of bioluminescence to identify bacterial genes required for host resistance; as a result, efficacious and genetically defined live attenuated vaccine candidates were developed.

Indexed as

LuminescenceMutagenesis, InsertionalMutationAnimalsBacterial VaccinesDNA Transposable ElementsEdwardsiella ictaluriEnterobacteriaceae InfectionsGenetics, MicrobialIctaluridaeNeutrophilsSerum Bactericidal TestVaccines, AttenuatedVirulenceVirulence FactorsBacterial VaccinesDNA Transposable ElementsVaccines, AttenuatedVirulence Factors

Identifiers

PMID19201969
PMCPMC2663204
OpenAlexW2006023877

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.