Evidence map›Paper›PMID 19199359›Full record

ArticleInternational journal of cancer2009

Actin and Vimentin proteins with N-terminal deletion detected in tumor-bearing rat livers induced by intraportal-vein injection of Ha-ras-transfected rat liver cells.

Yasushi Nakamura, Akari Kominami, Yoshiyuki Tsujimoto, Yuko Nakayama, Tsukasa Kitahashi, Sonoko Yoshimoto, Asuka Kubo, Shinpei Watanabe, Minami Kageyama, Meiko Yokoyama and 8 more

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In one paragraph

Article in International journal of cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 2 countries.

Yasushi NakamuraDepartment of Food Sciences and Nutritional Health, Kyoto Prefectural University, Shimogamo-Hangi, Sakyo, Kyoto, Japan. yas@kpu.ac.jp
Akari Kominami
Yoshiyuki Tsujimoto
Yuko Nakayama
Tsukasa Kitahashi
Sonoko Yoshimoto
Asuka Kubo
Shinpei Watanabe
Minami Kageyama
Meiko Yokoyama
Yasuhiro Kido
Yukiko Kobayashi
Masashi Kuwahata
Chia-Cheng Chang
Brad L Upham
James E Trosko
Eun Young Park
Kenji Sato
Kyoto Prefectural University · JPMichigan State University · US

Funding

Epigenetic toxicity of polycyclic aromatic hydrocarbonsR01ES013268 · NIEHS · MICHIGAN STATE UNIVERSITY · PI UPHAM, BRAD L. · 2006 to 2008
$1.1M
NIEHS NIH HHS R01 ES013268
6 · The paper itself

Abstract

The introduction of the tumorigenic v-Ha-ras oncogene-transformed rat liver epithelial cells (WBras), which is deficient in gap junctional intercellular communication (GJIC), into F344 rats, induces significant formation of hepatocellular tumors. GJIC plays a major role in maintaining tissue homeostasis. Using this in vivo tumor model system, we used 2-dimensional electrophoresis with isoelectric focusing in the first dimension and SDS-PAGE in the second dimension to globally identify proteins that are uniquely expressed in the livers of WBras-treated rats as compared to the sham control. Immunoblotting was used to identify Ras and Connexin43, which were the positive and negative marker proteins, respectively, of the introduced WBras cells. As predicted, immunoblotting indicated that the whole liver of tumor-bearing animals exhibited a decreased level of Connexin43 and an increased level of Ras. Connexin43 and GJIC were expressed and functional in normal liver, but not in the tumor. In addition to these 2 markers, an additional 4 proteins exhibited decreased levels and 2 proteins exhibited increased levels in the livers of tumor-bearing animals. N-Terminal sequencing analysis was used to identify these proteins, which were glucose-regulated protein 78, 2 isoforms of heat shock protein 60, and the beta-chain of ATP synthase for the down regulated proteins, and beta-Actin with a 46 amino acid deletion from its N-terminus and Vimentin with a 71 amino acid deletion from its N-terminus for the up regulated proteins. These data offer potentially new markers of liver tumorigenicity, particularly, Vimentin. (

Indexed as

Genes, rasActinsAnimalsCell CommunicationCell LineConnexin 43Electrophoresis, Gel, Two-DimensionalGap JunctionsHistocytochemistryLiverLiver NeoplasmsMalePortal VeinRatsRats, Inbred F344TransfectionActinsConnexin 43Vimentin

Identifiers

PMID19199359
PMCPMC2680316
OpenAlexW1973883470

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.