Evidence map›Paper›PMID 19196714›Full record

ArticleThe Journal of biological chemistry2009

Three Promoters Regulate Tissue- and Cell Type-specific Expression of Murine Interleukin-1 Receptor Type I.

Qun Chen, Hao Zhang, Qiming Li, Ying An, Miles Herkenham, Wenmin Lai, Phillip Popovich, Sudha Agarwal, Ning Quan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Interleukin-1R3 mediates interleukin-1-induced potassium current increase through fast activation of Akt kinase.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  7. Article
  8. Article
  9. Existence of seven human IL-1R1 promoters.Journal of inflammation research · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Qun ChenDepartment of Oral Biology, Ohio State University, Columbus, Ohio 43210, USA.
Hao Zhang
Qiming Li
Ying An
Miles Herkenham
Wenmin Lai
Phillip Popovich
Sudha Agarwal
Ning Quan
The Ohio State University · US

Funding

University of Iowa Clinical and Translational Science Program (TL1)UL1RR025755 · NCRR · OHIO STATE UNIVERSITY · PI JACKSON, REBECCA D · 2008 to 2011
$26.3M
Studies Of Central Nervous System Functional AnatomyZIAMH001090 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI HERKENHAM, MILES A. · 2009 to 2022
$19.3M
IL-1R1 promoter complex in the neuroendocrine, nervous, and immune systemsR01AI076926 · NIAID · OHIO STATE UNIVERSITY · PI QUAN, NING · 2008 to 2012
$1.9M
Intramural NIH HHSNCRR NIH HHS UL1 RR025755NIAID NIH HHS R01 AI076926
6 · The paper itself

Abstract

The type 1 interleukin-1 receptor (IL-1R1) mediates diverse functions of interleukin-1 (IL-1) in the nervous, immune, and neuroendocrine systems. It has been suggested previously that the versatile functions of IL-1 may in part be conferred by the multiple promoters of IL-1R1 that have been identified for the human IL-1R1 gene. Promoters for murine IL-1R1 (mIL-1R1) gene have not been studied in detail. We performed 5'-rapid amplification of cDNA ends to determine the transcription start sites (TSS) in mIL-1R1, using mRNAs derived from 24 different tissues. The results revealed three putative TSSs of mIL-1R1. Three full-length cDNAs containing these distinct TSSs were recovered in screens of cloned cDNA libraries. Translation of these cDNAs produced IL-1R1 proteins that were verified by Western blot analysis. IL-1 stimulation of the individual IL-1R1 proteins resulted in the activation of NF-kappaB. Promoter-reporter assay for genomic DNA sequences immediately upstream of the three TSSs validated that the sequences possess promoter activity in a cell type-specific manner. These promoters are termed P1, P2, and P3 of the mIL-1R1, in 5' to 3' order. Quantitative PCR analysis of P1-, P2-, and P3-specific mIL-1R1 mRNAs showed that there is tissue-specific distribution of these mRNAs in vivo, and there are distinct patterns of P1, P2, and P3 mRNA expression in different cell lines. In the brain, P3 mRNA is expressed preferentially in the dentate gyrus. Further, glucocorticoids differentially regulate these promoters in a cell type-specific manner. Together, these results suggest that the different IL-1R1 promoters contribute to the discrete and diverse actions of IL-1.

Indexed as

AnimalsDNA, ComplementaryGene Expression RegulationGene LibraryGlucocorticoidsInterleukin-1MiceOrgan SpecificityPromoter Regions, GeneticReceptors, Interleukin-1RNA, MessengerDNA, ComplementaryGlucocorticoidsInterleukin-1Receptors, Interleukin-1RNA, Messenger

Identifiers

PMID19196714
PMCPMC2659229
OpenAlexW2075955385

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.