Evidence map›Paper›PMID 19196430›Full record

ArticleJournal of neurochemistry2009

Mutant copper-zinc superoxide dismutase associated with amyotrophic lateral sclerosis binds to adenine/uridine-rich stability elements in the vascular endothelial growth factor 3'-untranslated region.

Xuelin Li, Liang Lu, Donald J Bush, Xiaowen Zhang, Lei Zheng, Esther A Suswam, Peter H King

Open access · bronzeAbstract read
In one paragraph

Article in Journal of neurochemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Low Molecular Weight Inhibitors Targeting the RNA-Binding Protein HuR.International journal of molecular sciences · 2023
    Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Gene and protein therapies utilizing VEGF for ALS.Pharmacology & therapeutics · 2014
    Review
  10. Article
  11. The complex molecular biology of amyotrophic lateral sclerosis (ALS).Progress in molecular biology and translational science · 2012
    Review
  12. HuR function in disease.Frontiers in bioscience (Landmark edition) · 2012
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Xuelin LiDepartment of Neurology, University of Alabama at Birmingham, Alabama, USA.
Liang Lu
Donald J Bush
Xiaowen Zhang
Lei Zheng
Esther A Suswam
Peter H King
University of Alabama at Birmingham · USBirmingham VA Medical Center · US

Funding

Dysregulation of VEGF RNA Stability in Amyotrophic Lateral SclerosisK08NS057664 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LU, LIANG · 2008 to 2012
$729k
Aberrant VEGF RNA Stability in Amyotrophic Lateral SclerosisR21NS058538 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KING, PETER H · 2007 to 2008
$349k
HuR regulates TDP-43 and FUS: implications for ALS pathogenesisI01BX003035 · VA · MICHAEL E DEBAKEY VA MEDICAL CENTER · PI LU, LIANG · 2016 to 2021
–
BLRD VA I01 BX003035NINDS NIH HHS K08 NS057664NINDS NIH HHS NS058538NINDS NIH HHS R21 NS058538
6 · The paper itself

Abstract

Vascular endothelial growth factor (VEGF) is a neurotrophic factor essential for maintenance of motor neurons. Loss of this factor produces a phenotype similar to amyotrophic lateral sclerosis (ALS). We recently showed that ALS-producing mutations of Cu/Zn-superoxide dismutase (SOD1) disrupt post-transcriptional regulation of VEGF mRNA, leading to significant loss of expression [Lu et al., J. Neurosci.27 (2007), 7929]. Mutant SOD1 was present in the ribonucleoprotein complex associated with adenine/uridine-rich elements (ARE) of the VEGF 3'-untranslated region (UTR). Here, we show by electrophoretic mobility shift assay that mutant SOD1 bound directly to the VEGF 3'-UTR with a predilection for AREs similar to the RNA stabilizer HuR. SOD1 mutants A4V and G37R showed higher affinity for the ARE than L38V or G93A. Wild-type SOD1 bound very weakly with an apparent K(d) 11- to 72-fold higher than mutant forms. Mutant SOD1 showed an additional lower shift with VEGF ARE that was accentuated in the metal-free state. A similar pattern of binding was observed with AREs of tumor necrosis factor-alpha and interleukin-8, except only a single shift predominated. Using an ELISA-based assay, we demonstrated that mutant SOD1 competes with HuR and neuronal HuC for VEGF 3'-UTR binding. To define potential RNA-binding domains, we truncated G37R, G93A and wild-type SOD1 and found that peptides from the N-terminal portion of the protein that included amino acids 32-49 could recapitulate the binding pattern of full-length protein. Thus, the strong RNA-binding affinity conferred by ALS-associated mutations of SOD1 may contribute to the post-transcriptional dysregulation of VEGF mRNA.

Indexed as

3' Untranslated RegionsAmyotrophic Lateral SclerosisAntigens, SurfaceELAV-Like Protein 1ELAV-Like Protein 3ELAV ProteinsElectrophoretic Mobility Shift AssayGene Expression RegulationHumansInterleukin-8MutationPeptide FragmentsProtein BindingProtein Structure, TertiaryRNA-Binding ProteinsRNA Processing, Post-Transcriptional3' Untranslated RegionsAntigens, SurfaceELAVL1 protein, humanELAVL3 protein, humanELAV-Like Protein 1ELAV-Like Protein 3ELAV ProteinsInterleukin-8Peptide FragmentsRNA-Binding ProteinsSuperoxide DismutaseTumor Necrosis Factor-alphaVascular Endothelial Growth Factor AVEGFA protein, human

Identifiers

PMID19196430
PMCPMC2646909
OpenAlexW2021639930

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.