Evidence map›Paper›PMID 19193899›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2009

The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.

Sean A Pintchovski, Carol L Peebles, Hong Joo Kim, Eric Verdin, Steven Finkbeiner

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
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  4. Review
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  6. Review
  7. Article
  8. Article
  9. Effect of pharmacological manipulations on Arc function.Current research in pharmacology and drug discovery · 2021
    Review
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  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
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  18. Review
  19. The Role of CREB, SRF, and MEF2 in Activity-Dependent Neuronal Plasticity in the Visual Cortex.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Sean A PintchovskiGladstone Institute of Neurological Disease, San Francisco, California 94158, USA.
Carol L Peebles
Hong Joo Kim
Eric Verdin
Steven Finkbeiner
University of California, San Francisco · USGladstone Institutes · USNeurological Surgery · USVIR Biotechnology (United States) · US

Funding

Tissue Culture CoreP01AG022074 · NIA · J. DAVID GLADSTONE INSTITUTES · PI MASLIAH, ELIEZER · 2003 to 2012
$27.0M
MECHANISMS OF HUNTINGTIN-INDUCED NEURODEGENERATIONR01NS039074 · NINDS · J. DAVID GLADSTONE INSTITUTES · PI FINKBEINER, STEVEN M · 2000 to 2017
$5.4M
NIA NIH HHS 2P01 AG022074NIA NIH HHS P01 AG022074NINDS NIH HHS 2NS R01 039074NINDS NIH HHS R01 NS039074
6 · The paper itself

Abstract

The immediate-early effector gene Arc/Arg3.1 is robustly upregulated by synaptic activity associated with learning and memory. Here we show in primary cortical neuron culture that diverse stimuli induce Arc expression through new transcription. Searching for regulatory regions important for Arc transcription, we found nine DNaseI-sensitive nucleosome-depleted sites at this genomic locus. A reporter gene encompassing these sites responded to synaptic activity in an NMDA receptor-dependent manner, consistent with endogenous Arc mRNA. Responsiveness mapped to two enhancer regions approximately 6.5 kb and approximately 1.4 kb upstream of Arc. We dissected these regions further and found that the proximal enhancer contains a functional and conserved "Zeste-like" response element that binds a putative novel nuclear protein in neurons. Therefore, activity regulates Arc transcription partly by a novel signaling pathway. We also found that the distal enhancer has a functional and highly conserved serum response element. This element binds serum response factor, which is recruited by synaptic activity to regulate Arc. Thus, Arc is the first target of serum response factor that functions at synapses to mediate plasticity.

Indexed as

AnimalsBase SequenceCells, CulturedCytoskeletal ProteinsGene Expression RegulationHumansImmediate-Early ProteinsMiceMolecular Sequence DataNerve Tissue ProteinsNeuronal PlasticityNeuronsPC12 CellsRatsSerum Response FactorTranscription Factorsactivity regulated cytoskeletal-associated proteinCytoskeletal ProteinsImmediate-Early ProteinsNerve Tissue ProteinsSerum Response FactorTranscription Factors

Identifiers

PMID19193899
PMCPMC2874324
OpenAlexW2162272208

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.