Evidence map›Paper›PMID 19193636›Full record

ArticleThe Journal of biological chemistry2009

Comparing pooled peptides with intact protein for accessing cross-presentation pathways for protective CD8+ and CD4+ T cells.

Hongwei Zhang, Hai Hong, Demin Li, Shiwu Ma, Ying Di, Adam Stoten, Neil Haig, Katalin Di Gleria, Zhanru Yu, Xiao-Ning Xu and 2 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 89 citations in OpenAlex.

  1. Trial
  2. Review
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  6. Article
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  11. Enhanced HPV16 E6/E7Cancer immunology, immunotherapy : CII · 2023
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  15. Article
  16. Env-independent protection of intrarectal SIV challenge by vaccine induction of Gag/Vif-specific CD8Molecular therapy : the journal of the American Society of Gene Therapy · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Hongwei ZhangMRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, Headington, Oxford OX3 9DS, United Kingdom.
Hai Hong
Demin Li
Shiwu Ma
Ying Di
Adam Stoten
Neil Haig
Katalin Di Gleria
Zhanru Yu
Xiao-Ning Xu
Andrew McMichael
Shisong Jiang
MRC Human Immunology Unit · GBJohn Radcliffe Hospital · GBUniversity of Oxford · GB

Funding

Medical Research Council MC_U137881015Medical Research Council MC_U137884177
6 · The paper itself

Abstract

To better understand the mechanisms of intracellular trafficking and presentation of exogenous peptides by antigen-presenting cells (APC), we compared the handling of overlapping 24-mer peptides from HIV Nef either mixed or covalently linked in tandem in one protein. Once internalized, peptides trafficked not only to endosomes but also to cytosol, and activated CD8(+) and CD4(+) T cells. In contrast, whole protein was found to traffic only to the endosomal compartments, and primarily activated CD4(+) T cells. Finally, with adjuvant, overlapping peptides were capable of protecting against lethal viral challenge, whereas the intact protein was less protective. These data suggest that overlapping long peptides are cross-presented through more varied intracellular routes and are more efficient in priming protective immunity than the whole protein.

Indexed as

Amino Acid SequenceAnimalsAntigen PresentationCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCells, CulturedCross-PrimingDendritic CellsMass SpectrometryMiceMolecular Sequence DataPeptidesPhenotypeProtein TransportRecombinant ProteinsPeptidesRecombinant Proteins

Identifiers

PMID19193636
PMCPMC2666570
OpenAlexW2054953556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.