Evidence map›Paper›PMID 19193630›Full record

ArticleHuman molecular genetics2009

Identification of familial and de novo microduplications of 22q11.21-q11.23 distal to the 22q11.21 microdeletion syndrome region.

Justine Coppinger, Donna McDonald-McGinn, Elaine Zackai, Kate Shane, Joan F Atkin, Alexander Asamoah, Robert Leland, David D Weaver, Susan Lansky-Shafer, Karen Schmidt and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 105 citations in OpenAlex.

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  11. Genotype and phenotype spectrum of NRAS germline variants.European journal of human genetics : EJHG · 2017
    Article
  12. Article
  13. Enrichment of mutations in chromatin regulators in people with Rett syndrome lacking mutations in MECP2.Genetics in medicine : official journal of the American College of Medical Genetics · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 12 institutions in 1 country.

Justine CoppingerSignature Genomic Laboratories, LLC, Spokane, WA 99207, USA.
Donna McDonald-McGinn
Elaine Zackai
Kate Shane
Joan F Atkin
Alexander Asamoah
Robert Leland
David D Weaver
Susan Lansky-Shafer
Karen Schmidt
Heidi Feldman
William Cohen
Judy Phalin
Berkley Powell
Blake C Ballif
Aaron Theisen
Elizabeth Geiger
Chad Haldeman-Englert
Tamim H Shaikh
Sulagna Saitta
Bassem A Bejjani
Lisa G Shaffer
Children's Hospital of Philadelphia · USChildren's Hospital of Pittsburgh · USSignature Research (United States) · USChildren's Hospital Central California · USCarle Foundation Hospital · USCheyenne VA Medical Center · USIndiana University – Purdue University Indianapolis · USNationwide Children's Hospital · USProvidence Sacred Heart Medical Center · USThe Ohio State University · USUniversity of Louisville · USWashington State University Spokane · US

Funding

Genetic Modifiers for 22q 11.2 Deletion SyndromeR01HL084410 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI MORROW, BERNICE E · 2007 to 2010
$3.3M
Copy Number Alterations in Genomic DisordersR01GM081519 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI SHAIKH, TAMIM H · 2007 to 2010
$2.4M
NHLBI NIH HHS R01 HL084410NIGMS NIH HHS GM081519
6 · The paper itself

Abstract

Deletions of the 22q11.2 region distal to the 22q11.21 microdeletion syndrome region have recently been described in individuals with mental retardation and congenital anomalies. Because these deletions are mediated by low-copy repeats (LCRs), located distal to the 22q11.21 DiGeorge/velocardiofacial microdeletion region, duplications are predicted to occur with a frequency equal to the deletion. However, few microduplications of this region have been reported. We report the identification of 18 individuals with microduplications of 22q11.21-q11.23. The duplication boundaries for all individuals are within LCRs distal to the DiGeorge/velocardiofacial microdeletion region. Clinical records for nine subjects reveal shared characteristics, but also several examples of contradicting clinical features (e.g. macrocephaly versus microcephaly and upslanting versus downslanting palpebral fissures). Of 12 cases for whom parental DNA samples were available for testing, one is de novo and 11 inherited the microduplication from a parent, three of whom reportedly have learning problems or developmental delay. The variable phenotypes and preponderance of familial cases obfuscate the clinical relevance of the molecular data and emphasize the need for careful parental assessments and clinical correlations.

Indexed as

Abnormalities, MultipleChildChromosome DeletionDiGeorge SyndromeFemaleGene DuplicationHumansIntellectual DisabilityMaleOligonucleotide Array Sequence Analysis

Identifiers

PMID19193630
PMCPMC2664143
OpenAlexW2114760562

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.