Evidence map›Paper›PMID 19193035›Full record

ArticleACS chemical biology2009

Indo-1 derivatives for local calcium sensing.

Michael Bannwarth, Ivan R Correa, Monika Sztretye, Sandrine Pouvreau, Cindy Fellay, Annina Aebischer, Leandro Royer, Eduardo Rois, Kai Johnsson

Abstract read
In one paragraph

Article in ACS chemical biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Calcium imaging: a technique to monitor calcium dynamics in biological systems.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Origins of CaBiochemistry · 2021
    Article
  10. Article
  11. Sensing Senses: Optical Biosensors to Study Gustation.Sensors (Basel, Switzerland) · 2020
    Review
  12. Article
  13. Visualization of long-term MgChemical science · 2017
    Article
  14. Exploring cells with targeted biosensors.The Journal of general physiology · 2017
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Michael BannwarthInstitute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015, Lausanne, Switzerland.
Ivan R Correa
Monika Sztretye
Sandrine Pouvreau
Cindy Fellay
Annina Aebischer
Leandro Royer
Eduardo Rois
Kai Johnsson

Funding

Skeletal Muscle. Ca Release Control Inside the Sarcoplasmic Reticulum.R01AR049184 · NIAMS · RUSH UNIVERSITY MEDICAL CENTER · PI RIOS, EDUARDO · 2003 to 2013
$3.1M
CALCIUM MOVEMENTS IN EXCITATION-CONTRACTION COUPLING.R37AR032808 · NIAMS · RUSH UNIVERSITY MEDICAL CENTER · PI RIOS, EDUARDO · 1996 to 2005
$2.6M
CALCIUM MOVEMENTS IN EXCITATION-CONTRACTION COUPLINGR01AR032808 · NIAMS · RUSH UNIVERSITY MEDICAL CENTER · PI RIOS, EDUARDO · 1986 to 2011
$1.6M
NIAMS NIH HHS AR032808NIAMS NIH HHS AR049184NIAMS NIH HHS R01 AR032808NIAMS NIH HHS R01 AR049184NIAMS NIH HHS R37 AR032808
6 · The paper itself

Abstract

The role of calcium in signal transduction relies on the precise spatial and temporal control of its concentration. The existing means to detect fluctuations in Ca2+ concentrations with adequate temporal and spatial resolution are limited. We introduce here a method to measure Ca2+ concentrations in defined locations in living cells that is based on linking the Ca2+-sensitive dye Indo-1 to SNAP-tag fusion proteins. Fluorescence spectroscopy of SNAP-Indo-1 conjugates in vitro showed that the conjugates retained the Ca2+-sensing ability of Indo-1. In a proof-of-principle experiment, local Ca2+ sensing was demonstrated in single cells dissociated from muscle of adult mice expressing a nucleus-localized SNAP-tag fusion. Ca2+ concentrations inside nuclei of resting cells were measured by shifted excitation and emission ratioing of confocal microscopic images of fluorescence. After permeabilizing the plasma membrane, changes in the bathing solution induced corresponding changes in nuclear [Ca2+] that were readily detected and used for a preliminary calibration of the technique. This work thus demonstrates the synthesis and application of SNAP-tag-based Ca2+ indicators that combine the spatial specificity of genetically encoded calcium indicators with the advantageous spectroscopic properties of synthetic indicators.

Indexed as

AnimalsCalciumCell NucleusFluorescent DyesGuanineIndolesMiceMicroscopy, FluorescenceMuscle Fibers, SkeletalO(6)-Methylguanine-DNA MethyltransferaseRecombinant Fusion ProteinsCalciumFluorescent DyesGuanineindo-1IndolesO(6)-benzylguanineO(6)-Methylguanine-DNA MethyltransferaseRecombinant Fusion Proteins

Identifiers

PMID19193035
PMCPMC3652559

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.