Evidence map›Paper›PMID 19187560›Full record

ArticleBMC microbiology2009

A Candida albicans early stage biofilm detachment event in rich medium.

Adnane Sellam, Thamir Al-Niemi, Kathleen McInnerney, Susan Brumfield, Andre Nantel, Peter A Suci

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Transcriptional Control of Hypoxic Hyphal Growth in the Fungal PathogenFrontiers in cellular and infection microbiology · 2021
    Article
  6. Function Analysis ofFrontiers in fungal biology · 2021
    Article
  7. How Biofilm Growth AffectsFrontiers in microbiology · 2020
    Review
  8. Article
  9. Review
  10. Assessment and Optimizations of Candida albicansAntimicrobial agents and chemotherapy · 2017
    Article
  11. Plasticity of Candida albicans Biofilms.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  12. Article
  13. Article
  14. Candida albicans Biofilms and Human Disease.Annual review of microbiology · 2015
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Adnane SellamBiotechnology Research Institute, National Research Council of Canada, Montreal, Quebec, Canada. adnane.sellam@cnrc-nrc.gc.ca
Thamir Al-Niemi
Kathleen McInnerney
Susan Brumfield
Andre Nantel
Peter A Suci
Montana State University · USBiotechnology Research Institute · CANational Academies of Sciences, Engineering, and Medicine · US

Funding

Mobilization of Candida albicans BiofilmsR21GM070554 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI SUCI, PETER · 2006 to 2007
$344k
NIGMS NIH HHS 1 R21 GM070554-01A1
6 · The paper itself

Abstract

backgroundDispersal from Candida albicans biofilms that colonize catheters is implicated as a primary factor in the link between contaminated catheters and life threatening blood stream infections (BSI). Appropriate in vitro C. albicans biofilm models are needed to probe factors that induce detachment events.

resultsUsing a flow through system to culture C. albicans biofilms we characterized a detachment process which culminates in dissociation of an entire early stage biofilm from a silicone elastomer surface. We analyzed the transcriptome response at time points that bracketed an abrupt transition in which a strong adhesive association with the surface is weakened in the initial stages of the process, and also compared batch and biofilm cultures at relevant time points. K means analysis of the time course array data revealed categories of genes with similar patterns of expression that were associated with adhesion, biofilm formation and glycoprotein biosynthesis. Compared to batch cultures the biofilm showed a pattern of expression of metabolic genes that was similar to the C. albicans response to hypoxia. However, the loss of strong adhesion was not obviously influenced by either the availability of oxygen in the medium or at the silicone elastomer surface. The detachment phenotype of mutant strains in which selected genes were either deleted or overexpressed was characterized. The microarray data indicated that changes associated with the detachment process were complex and, consistent with this assessment, we were unable to demonstrate that transcriptional regulation of any single gene was essential for loss of the strong adhesive association.

conclusionThe massive dispersal of the early stage biofilm from a biomaterial surface that we observed is not orchestrated at the level of transcriptional regulation in an obvious manner, or is only regulated at this level by a small subpopulation of cells that mediate adhesion to the surface.

Indexed as

BiofilmsCandida albicansCell AdhesionGene Expression ProfilingGene Expression Regulation, FungalMicroscopy, Electron, ScanningOligonucleotide Array Sequence AnalysisRNA, FungalShear StrengthSilicone ElastomersTime FactorsRNA, FungalSilicone Elastomers

Identifiers

PMID19187560
PMCPMC2647545
OpenAlexW2150328671

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.