Evidence map›Paper›PMID 19184630›Full record

ArticleMolecular diversity2009

Three-class classification models of logS and logP derived by using GA-CG-SVM approach.

Hui Zhang, Ming-Li Xiang, Chang-Ying Ma, Qi Huang, Wei Li, Yang Xie, Yu-Quan Wei, Sheng-Yong Yang

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Article in Molecular diversity, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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  4. Review
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors.

Hui ZhangState Key Laboratory of Biotherapy, West China Hospital, West China Medical School, Sichuan University, Chengdu, Sichuan, 610041, People's Republic of China.
Ming-Li Xiang
Chang-Ying Ma
Qi Huang
Wei Li
Yang Xie
Yu-Quan Wei
Sheng-Yong Yang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this investigation, three-class classification models of aqueous solubility (logS) and lipophilicity (logP) have been developed by using a support vector machine (SVM) method combined with a genetic algorithm (GA) for feature selection and a conjugate gradient method (CG) for parameter optimization. A 5-fold cross-validation and an independent test set method were used to evaluate the SVM classification models. For logS, the overall prediction accuracy is 87.1% for training set and 90.0% for test set. For logP, the overall prediction accuracy is 81.0% for training set and 82.0% for test set. In general, for both logS and logP, the prediction accuracies of three-class models are slightly lower by several percent than those of two-class models. A comparison between the performance of GA-CG-SVM models and that of GA-SVM models shows that the SVM parameter optimization has a significant impact on the quality of SVM classification model.

Indexed as

AlgorithmsArtificial IntelligenceModels, ChemicalGeneticsHydrophobic and Hydrophilic InteractionsSensitivity and SpecificitySolubilityWaterWater

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.