Evidence map›Paper›PMID 19182104›Full record

ArticleThe Plant cell2009

Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts.

Kenji Okuda, Anne-Laure Chateigner-Boutin, Takahiro Nakamura, Etienne Delannoy, Mamoru Sugita, Fumiyoshi Myouga, Reiko Motohashi, Kazuo Shinozaki, Ian Small, Toshiharu Shikanai

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 223 citations in OpenAlex.

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  12. The ATP Synthase γ Subunit ATPC1 Regulates RNA Editing in Chloroplasts.International journal of molecular sciences · 2023
    Article
  13. Article
  14. Review
  15. Review
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  20. iScience · 2021
    Article

43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Kenji OkudaDepartment of Botany, Graduate School of Science, Kyoto University, Kyoto 606-8502 Japan.
Anne-Laure Chateigner-Boutin
Takahiro Nakamura
Etienne Delannoy
Mamoru Sugita
Fumiyoshi Myouga
Reiko Motohashi
Kazuo Shinozaki
Ian Small
Toshiharu Shikanai
University of Western Australia · AUKyoto University · JPRIKEN Center for Sustainable Resource Science · JPKyushu University · JPNagoya University · JPUniversity of Shizuoka · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plant-specific DYW subclass of pentatricopeptide repeat proteins has been postulated to be involved in RNA editing of organelle transcripts. We discovered that the DYW proteins CHLORORESPIRATORY REDUCTION22 (CRR22) and CRR28 are required for editing of multiple plastid transcripts but that their DYW motifs are dispensable for editing activity in vivo. Replacement of the DYW motifs of CRR22 and CRR28 by that of CRR2, which has been shown to be capable of endonucleolytic cleavage, blocks the editing activity of both proteins. In return, the DYW motifs of neither CRR22 nor CRR28 can functionally replace that of CRR2. We propose that different DYW family members have acquired distinct functions in the divergent processes of RNA maturation, including RNA cleavage and RNA editing.

Indexed as

RNA EditingAmino Acid SequenceArabidopsisArabidopsis ProteinsChloroplastsGene Expression Regulation, PlantMolecular Sequence DataMutagenesis, InsertionalMutationPlants, Genetically ModifiedProtein Structure, TertiaryRecombinant ProteinsRNA, PlantRNA ProbesArabidopsis ProteinsRecombinant ProteinsRNA, PlantRNA Probes

Identifiers

PMID19182104
PMCPMC2648089
OpenAlexW2142768825

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.